RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 DIO1P49895 249 aa20.06■□□□□ 0.8
TRAF4-207ENST00000461195 POLR2HP52434 150 aaKnown RBP20.06■□□□□ 0.8
TRAF4-207ENST00000461195 TMEM201Q5SNT2 666 aa20.06■□□□□ 0.8
TRAF4-207ENST00000461195 DLEU7Q6UYE1 221 aa20.06■□□□□ 0.8
TRAF4-207ENST00000461195 STK32CQ86UX6 486 aa20.06■□□□□ 0.8
TRAF4-207ENST00000461195 SPATA9Q9BWV2 254 aa20.06■□□□□ 0.8
TRAF4-207ENST00000461195 CLEC4MQ9H2X3 399 aaPredicted RBP20.06■□□□□ 0.8
TRAF4-207ENST00000461195 KLHL13Q9P2N7 655 aa20.06■□□□□ 0.8
TRAF4-207ENST00000461195 SETD2Q9BYW2 2564 aaPredicted RBP20.05■□□□□ 0.8
TRAF4-207ENST00000461195 TMED7-TICAM2A0A0A6YYA0 188 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 C16orf97H3BN30 126 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 SULT2B1O00204 365 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 PGM3O95394 542 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 GKN3PP0CG01 181 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 GPX2P18283 190 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 GUCY1A3Q02108 690 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 EXOC3L2Q2M3D2 409 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 ZNF311Q5JNZ3 666 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 ZNF550Q7Z398 422 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 DHDDSQ86SQ9 333 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 TUSC5Q8IXB3 177 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 CLIP4Q8N3C7 705 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 DPP10Q8N608 796 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 NFKBIDQ8NI38 313 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 TACO1Q9BSH4 297 aaKnown RBP20.05■□□□□ 0.8
TRAF4-207ENST00000461195 IKZF5Q9H5V7 419 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 C12orf49Q9H741 205 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 FANCFQ9NPI8 374 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 KLHL9Q9P2J3 617 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 OSGIN1Q9UJX0 560 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 TMED7Q9Y3B3 224 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 HDGFL3Q9Y3E1 203 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 TESMINQ9Y4I5 508 aa20.05■□□□□ 0.8
TRAF4-207ENST00000461195 CASKO14936 926 aa20.04■□□□□ 0.8
TRAF4-207ENST00000461195 SMAD9O15198 467 aaKnown RBP20.04■□□□□ 0.8
TRAF4-207ENST00000461195 YES1P07947 543 aa20.04■□□□□ 0.8
TRAF4-207ENST00000461195 ETS2P15036 469 aa20.04■□□□□ 0.8
TRAF4-207ENST00000461195 CCNA2P20248 432 aa20.04■□□□□ 0.8
TRAF4-207ENST00000461195 TACR3P29371 465 aa20.04■□□□□ 0.8
TRAF4-207ENST00000461195 ACAA2P42765 397 aaKnown RBP20.04■□□□□ 0.8
TRAF4-207ENST00000461195 ARFIP2P53365 341 aa20.04■□□□□ 0.8
TRAF4-207ENST00000461195 CDK6Q00534 326 aa20.04■□□□□ 0.8
TRAF4-207ENST00000461195 RUNDC3AQ59EK9 446 aa20.04■□□□□ 0.8
TRAF4-207ENST00000461195 FBXW10Q5XX13 1052 aa20.04■□□□□ 0.8
TRAF4-207ENST00000461195 BEND4Q6ZU67 534 aa20.04■□□□□ 0.8
TRAF4-207ENST00000461195 C10orf111Q8N326 155 aa20.04■□□□□ 0.8
TRAF4-207ENST00000461195 CPPED1Q9BRF8 314 aaPredicted RBP20.04■□□□□ 0.8
TRAF4-207ENST00000461195 CCDC134Q9H6E4 229 aa20.04■□□□□ 0.8
TRAF4-207ENST00000461195 MRGBPQ9NV56 204 aa20.04■□□□□ 0.8
TRAF4-207ENST00000461195 ITGB1BP2Q9UKP3 347 aa20.04■□□□□ 0.8
TRAF4-207ENST00000461195 ZNF208O43345 1280 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 ATP8B1O43520 1251 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 CYTIPO60759 359 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 PMS2P2O95744 297 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 FESP07332 822 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 CCKARP32238 428 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 MAP2K6P52564 334 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 COPZ1P61923 177 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 RASGEF1BQ0VAM2 473 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 CGB2Q6NT52 195 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 REEP3Q6NUK4 255 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 RETREG3Q86VR2 466 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 DDIT4LQ96D03 193 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 ZHX1-C8orf76Q96EF9 292 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 ARL5BQ96KC2 179 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 WFIKKN1Q96NZ8 548 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 PSD2Q9BQI7 771 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 MED18Q9BUE0 208 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 KLHL4Q9C0H6 718 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 OR11A1Q9GZK7 315 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 ADAM19Q9H013 955 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 TMEM38AQ9H6F2 299 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 BCO1Q9HAY6 547 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 KLHL28Q9NXS3 571 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 CHST2Q9Y4C5 530 aa20.03■□□□□ 0.8
TRAF4-207ENST00000461195 TMEM72A0PK05 275 aa20.02■□□□□ 0.8
TRAF4-207ENST00000461195 DNPH1O43598 174 aa20.02■□□□□ 0.8
TRAF4-207ENST00000461195 WBP2NLQ6ICG8 309 aa20.02■□□□□ 0.8
TRAF4-207ENST00000461195 NUFIP2Q7Z417 695 aaKnown RBP20.02■□□□□ 0.8
TRAF4-207ENST00000461195 MTDHQ86UE4 582 aaKnown RBP20.02■□□□□ 0.8
TRAF4-207ENST00000461195 CDC20BQ86Y33 519 aa20.02■□□□□ 0.8
TRAF4-207ENST00000461195 KRT73Q86Y46 540 aa20.02■□□□□ 0.8
TRAF4-207ENST00000461195 CADM2Q8N3J6 435 aa20.02■□□□□ 0.8
TRAF4-207ENST00000461195 ANKRD27Q96NW4 1050 aa20.02■□□□□ 0.8
TRAF4-207ENST00000461195 CGREF1Q99674 301 aa20.02■□□□□ 0.8
TRAF4-207ENST00000461195 KLK2P20151 261 aa20.01■□□□□ 0.79
TRAF4-207ENST00000461195 SLC6A2P23975 617 aa20.01■□□□□ 0.79
TRAF4-207ENST00000461195 SF3A3Q12874 501 aaKnown RBP eCLIP20.01■□□□□ 0.792e-6■■■□□ 14.8
TRAF4-207ENST00000461195 NFYCQ13952 458 aa20.01■□□□□ 0.79
TRAF4-207ENST00000461195 SCARB2Q14108 478 aa20.01■□□□□ 0.79
TRAF4-207ENST00000461195 TFAP2EQ6VUC0 442 aa20.01■□□□□ 0.79
TRAF4-207ENST00000461195 SERPINA11Q86U17 422 aa20.01■□□□□ 0.79
TRAF4-207ENST00000461195 NRGNQ92686 78 aa20.01■□□□□ 0.79
TRAF4-207ENST00000461195 SLC35B4Q969S0 331 aa20.01■□□□□ 0.79
TRAF4-207ENST00000461195 DNAJA3Q96EY1 480 aa20.01■□□□□ 0.79
TRAF4-207ENST00000461195 SPATA5L1Q9BVQ7 753 aa20.01■□□□□ 0.79
TRAF4-207ENST00000461195 ZNF226Q9NYT6 803 aa20.01■□□□□ 0.79
TRAF4-207ENST00000461195 TMEM181Q9P2C4 612 aa20.01■□□□□ 0.79
TRAF4-207ENST00000461195 ING1Q9UK53 422 aaPredicted RBP20.01■□□□□ 0.79
TRAF4-207ENST00000461195 TRAPPC4Q9Y296 219 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms