RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 ELL3Q9HB65 397 aaPredicted RBP3.24□□□□□ -1.89
CCDC58-202ENST00000460810 LYRM4Q9HD34 91 aa3.24□□□□□ -1.89
CCDC58-202ENST00000460810 SPHK2Q9NRA0 654 aa3.24□□□□□ -1.89
CCDC58-202ENST00000460810 AGPAT3Q9NRZ7 376 aa3.24□□□□□ -1.89
CCDC58-202ENST00000460810 C20orf96Q9NUD7 363 aaPredicted RBP3.24□□□□□ -1.89
CCDC58-202ENST00000460810 MLXQ9UH92 298 aa3.24□□□□□ -1.89
CCDC58-202ENST00000460810 VSTM2BA6NLU5 285 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 ARHGEF33A8MVX0 844 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 TRDMT1O14717 391 aaKnown RBP3.23□□□□□ -1.89
CCDC58-202ENST00000460810 PFKFB2O60825 505 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 TGM6O95932 706 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 IGHG1P01857 330 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 MMP1P03956 469 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 IVLP07476 585 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 PATE4P0C8F1 98 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 ZNF43P17038 809 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 PRKACGP22612 351 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 CD80P33681 288 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 STARP49675 285 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 MFAP2P55001 183 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 RIPK4P57078 832 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 ERVK11-1P61568 191 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 ITIH4Q14624 930 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 CCL14Q16627 93 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 HLA-BQ31612 363 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 MS4A18Q3C1V0 323 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 MUC21Q5SSG8 566 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 PWWP2BQ6NUJ5 590 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 UTS2BQ765I0 119 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 SSX9Q7RTT3 188 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 SLC47A2Q86VL8 602 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 MICU2Q8IYU8 434 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 GABRG1Q8N1C3 465 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 CSGALNACT2Q8N6G5 542 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 OR52H1Q8NGJ2 320 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 RFESDQ8TAC1 157 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 ZNF519Q8TB69 540 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 KIFAP3Q92845 792 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 TOMM40LQ969M1 308 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 TOP1MTQ969P6 601 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 ATXN7L3BQ96GX2 97 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 CELF6Q96J87 481 aaKnown RBP3.23□□□□□ -1.89
CCDC58-202ENST00000460810 PLEKHA8Q96JA3 519 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 KCNA7Q96RP8 456 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 CNN2Q99439 309 aaKnown RBP3.23□□□□□ -1.89
CCDC58-202ENST00000460810 HSD17B14Q9BPX1 270 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 MAPKAP1Q9BPZ7 522 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 WDR13Q9H1Z4 485 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 NEUROG2Q9H2A3 272 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 ELOVL6Q9H5J4 265 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 MRPS30Q9NP92 439 aaKnown RBP3.23□□□□□ -1.89
CCDC58-202ENST00000460810 CHRAC1Q9NRG0 131 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 ELOVL2Q9NXB9 296 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 MTCH1Q9NZJ7 389 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 THAP10Q9P2Z0 257 aaPredicted RBP3.23□□□□□ -1.89
CCDC58-202ENST00000460810 ERVW-1Q9UQF0 538 aa3.23□□□□□ -1.89
CCDC58-202ENST00000460810 TRGV8A0A0C4DH27 118 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 TEX48A0A1B0GUV7 120 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 PP2D1A8MPX8 630 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 ZNF701M0R085 212 aaPredicted RBP3.22□□□□□ -1.89
CCDC58-202ENST00000460810 CXCL13O43927 109 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 CCDC172P0C7W6 258 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 UBTFL6P0CB48 400 aaPredicted RBP3.22□□□□□ -1.89
CCDC58-202ENST00000460810 UMPSP11172 480 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 GNB3P16520 340 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 MSR1P21757 451 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 U2AF2P26368 475 aaKnown RBP eCLIP3.22□□□□□ -1.89
CCDC58-202ENST00000460810 ANXA13P27216 316 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 OPRD1P41143 372 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 ETV5P41161 510 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 SLC8A3P57103 927 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 SNRPD1P62314 119 aaKnown RBP3.22□□□□□ -1.89
CCDC58-202ENST00000460810 RAB11AP62491 216 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 PAX5Q02548 391 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 ZFP36L1Q07352 338 aaKnown RBP3.22□□□□□ -1.89
CCDC58-202ENST00000460810 IL18R1Q13478 541 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 RAB11BQ15907 218 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 DUSP7Q16829 419 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 TRIM16LQ309B1 348 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 TMEM30BQ3MIR4 351 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 GLYR1Q49A26 553 aaPredicted RBP3.22□□□□□ -1.89
CCDC58-202ENST00000460810 LY6G6FQ5SQ64 297 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 ADAMTSL4-AS1Q5T5F5 129 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 REP15Q6BDI9 236 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 LRRC31Q6UY01 552 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 LILRB4Q8NHJ6 448 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 TRUB1Q8WWH5 349 aaKnown RBP3.22□□□□□ -1.89
CCDC58-202ENST00000460810 GMPPAQ96IJ6 420 aaPredicted RBP3.22□□□□□ -1.89
CCDC58-202ENST00000460810 ZNF578Q96N58 590 aaPredicted RBP3.22□□□□□ -1.89
CCDC58-202ENST00000460810 CLCC1Q96S66 551 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 CYP2S1Q96SQ9 504 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 RNF2Q99496 336 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 P2RY13Q9BPV8 354 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 SLC35A5Q9BS91 424 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 ILKAPQ9H0C8 392 aaPredicted RBP3.22□□□□□ -1.89
CCDC58-202ENST00000460810 NIPAL2Q9H841 368 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 CUTCQ9NTM9 273 aa3.22□□□□□ -1.89
CCDC58-202ENST00000460810 PAK1IP1Q9NWT1 392 aaPredicted RBP3.22□□□□□ -1.89
CCDC58-202ENST00000460810 BFARQ9NZS9 450 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms