RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 CRYBA2P53672 197 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 GFRA1P56159 465 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 FOXF1Q12946 379 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 DGCR6Q14129 220 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 TMEM44Q2T9K0 475 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 SYT14P1Q58G82 188 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 EEF1A1P5Q5VTE0 462 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 ZNF324BQ6AW86 544 aaPredicted RBP9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 OR6S1Q8NH40 331 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 CANT1Q8WVQ1 401 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 CPNE4Q96A23 557 aaPredicted RBP9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 SDCCAG3Q96C92 435 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 DUS3LQ96G46 650 aaKnown RBP9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 KLHL15Q96M94 604 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 USB1Q9BQ65 265 aaKnown RBP9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 TMEM43Q9BTV4 400 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 OSBPL10Q9BXB5 764 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 AMBRA1Q9C0C7 1298 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 ARMC1Q9NVT9 282 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 NDUFAF4Q9P032 175 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 OSGIN1Q9UJX0 560 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 MCTS1Q9ULC4 181 aaKnown RBP9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 TRAPPC4Q9Y296 219 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 TMEM5Q9Y2B1 443 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 TMED7Q9Y3B3 224 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 MED31Q9Y3C7 131 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 CHST2Q9Y4C5 530 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 V9GYQ6 96 aa9.96□□□□□ -0.82
SMNDC1-203ENST00000460483 TRAV36DV7A0A075B6V5 113 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 H0Y3Z8 333 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 J3QL48 77 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 hCG_2039718K7EN88 272 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 E2F6O75461 281 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 SYNGR4O95473 234 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 MT-ATP6P00846 226 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 CST1P01037 141 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 LDLRP01130 860 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 HIST1H2ABP04908 130 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 BMP7P18075 431 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 IDUAP35475 653 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 MMP16P51512 607 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 CDH12P55289 794 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 SLC35A1P78382 337 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 SPIBQ01892 262 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 PIN1Q13526 163 aaPredicted RBP9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 EIF2S3LQ2VIR3 472 aaKnown RBP9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 FGD3Q5JSP0 725 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 RNFT1Q5M7Z0 435 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 DCST1Q5T197 706 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 OR2T5Q6IEZ7 315 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 MTFR2Q6P444 385 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 POMZP3Q6PJE2 187 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 ZNF730Q6ZMV8 503 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 HIST3H2AQ7L7L0 130 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 ATG4DQ86TL0 474 aaPredicted RBP9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 ADGRG5Q8IZF4 528 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 GALNT11Q8NCW6 608 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 PAPD5Q8NDF8 572 aaKnown RBP9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 OR2T29Q8NH02 315 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 ZPLD1Q8TCW7 415 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 ACOT11Q8WXI4 607 aaPredicted RBP9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 HIST1H2ACQ93077 130 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 C3orf49Q96BT1 292 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 C7orf34Q96L11 122 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 TIMP4Q99727 224 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 NAA11Q9BSU3 229 aaPredicted RBP9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 PRRG4Q9BZD6 226 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 SLC6A15Q9H2J7 730 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 TP63Q9H3D4 680 aaPredicted RBP9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 NMNAT1Q9HAN9 279 aaPredicted RBP9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 CTPS2Q9NRF8 586 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 C6orf203Q9P0P8 240 aaPredicted RBP9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 DNAJB9Q9UBS3 223 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 SLC7A7Q9UM01 511 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 ZNF337Q9Y3M9 751 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 CORINQ9Y5Q5 1042 aa9.95□□□□□ -0.82
SMNDC1-203ENST00000460483 TPRP12270 2363 aaKnown RBP9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 A0A1B0GTH9 108 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 NPIPA2E9PIF3 369 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 NPIPA3F8WFD2 350 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 SULT2B1O00204 365 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 EIF1AYO14602 144 aaKnown RBP9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 OIP5O43482 229 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 SLC19A2O60779 497 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 VAMP5O95183 116 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 PMS2P2O95744 297 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 EPPINO95925 133 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 HTR2AP28223 471 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 CARD18P57730 90 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 RAC3P60763 192 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 VLDLRP98155 873 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 HOXC5Q00444 222 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 KPNB1Q14974 876 aaKnown RBP9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 TOMM34Q15785 309 aaPredicted RBP9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 TMEM176BQ3YBM2 270 aaPredicted RBP9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 ANKDD1AQ495B1 522 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 FAM69AQ5T7M9 428 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 HBMQ6B0K9 141 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 TMEM211Q6ICI0 200 aa9.94□□□□□ -0.82
SMNDC1-203ENST00000460483 OR2A2Q6IF42 318 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms