RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 KIAA1211LQ6NV74 962 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 OR2T27Q8NH04 317 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 SIAEQ9HAT2 523 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 FGF22Q9HCT0 170 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 ZNF225Q9UK10 706 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 TBX21Q9UL17 535 aa13.74□□□□□ -0.21
PTPRU-205ENST00000460170 A0A1B0GWA3 101 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 EEF1E1-BLOC1S5C9J1V9 151 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 HMGN4O00479 90 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 HMGB3O15347 200 aaKnown RBP13.73□□□□□ -0.21
PTPRU-205ENST00000460170 ZNF264O43296 627 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 DNAJB6O75190 326 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 ETHE1O95571 254 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 PRPH2P23942 346 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 POU3F4P49335 361 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 DCAF7P61962 342 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 FOXK2Q01167 660 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 LYSMD2Q8IV50 215 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 ZNF683Q8IZ20 524 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 DNAJC5GQ8N7S2 189 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 C7orf34Q96L11 122 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 SLC5A7Q9GZV3 580 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 UBQLN3Q9H347 655 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 ZNF281Q9Y2X9 895 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 RNF215Q9Y6U7 377 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 TMPRSS11DO60235 418 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 SLC22A5O76082 557 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 FUCA1P04066 466 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 F13BP05160 661 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 APEX1P27695 318 aaKnown RBP13.73□□□□□ -0.21
PTPRU-205ENST00000460170 MAT1AQ00266 395 aaKnown RBP13.73□□□□□ -0.21
PTPRU-205ENST00000460170 OR51Q1Q8NH59 317 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 GHSRQ92847 366 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 ELMOD3Q96FG2 381 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 SLC25A44Q96H78 314 aaPredicted RBP13.73□□□□□ -0.21
PTPRU-205ENST00000460170 KIR3DX1Q9H7L2 352 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 FZD7O75084 574 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 SFTPDP35247 375 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 PDZD9Q8IXQ8 264 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 SIMC1Q8NDZ2 872 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 ZNF566Q969W8 418 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 DHRS1Q96LJ7 313 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 C1GALT1Q9NS00 363 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 MYEF2Q9P2K5 600 aaKnown RBP13.73□□□□□ -0.21
PTPRU-205ENST00000460170 HHLA2Q9UM44 414 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 A0A0G2JMP0 313 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 SERINC4A6NH21 518 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 SLC35E2P0CK97 266 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 PIPP12273 146 aaPredicted RBP13.73□□□□□ -0.21
PTPRU-205ENST00000460170 OR1D4P47884 311 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 B4GALNT1Q00973 533 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 P2RY14Q15391 338 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 OR7A5Q15622 319 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 SLC7A5P1Q8MH63 180 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 GPR137CQ8N3F9 429 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 OR4M2Q8NGB6 313 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 CUTCQ9NTM9 273 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 RBFOX1Q9NWB1 397 aaKnown RBP13.73□□□□□ -0.21
PTPRU-205ENST00000460170 LRIT1Q9P2V4 623 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 THSD7AQ9UPZ6 1657 aa13.73□□□□□ -0.21
PTPRU-205ENST00000460170 CDC14CA4D256 554 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 H7C417 338 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 SEC14L5O43304 696 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 SLC2A5P22732 501 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 LSSP48449 732 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 MTNR1BP49286 362 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 SIRPAP78324 504 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 NKPD1Q17RQ9 610 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 SYT14P1Q58G82 188 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 TMEM244Q5VVB8 128 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 FAM219BQ5XKK7 198 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 B4GALT7Q9UBV7 327 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 POLHQ9Y253 713 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 P04436 131 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 RAB40ALP0C0E4 278 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 HOXD12P35452 270 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 HTR3AP46098 478 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 EPHA5P54756 1037 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 ARL6IP1Q15041 203 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 CD300LGQ6UXG3 332 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 GSG1LQ6UXU4 331 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 LACC1Q8IV20 430 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 OR52N1Q8NH53 320 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 RAB40AQ8WXH6 277 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 KCNN3Q9UGI6 736 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 TRDV1A0A1B0GX56 115 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 GOSR2O14653 212 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 MT-ND4P03905 459 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 CLEC2LP0C7M8 214 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 TEAD1P28347 426 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 SHC1P29353 583 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 FIP1L1Q6UN15 594 aaKnown RBP13.72□□□□□ -0.21
PTPRU-205ENST00000460170 NANOGP1Q8N7R0 232 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 GALNT6Q8NCL4 622 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 NTN4Q9HB63 628 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 FKBP14Q9NWM8 211 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 SLC39A1Q9NY26 324 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 TTC3P53804 2025 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 BORCS7-ASMTA0A0B4J1R7 106 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 A0A1W2PR48 441 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms