RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 SAMD4AQ9UPU9 718 aaKnown RBP9.61□□□□□ -0.87
UBR4-208ENST00000459947 PYCARD-AS1I3L0S3 204 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 CXCR6O00574 342 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 MSTNO14793 375 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 AKAP8O43823 692 aaKnown RBP9.61□□□□□ -0.87
UBR4-208ENST00000459947 GMFGO60234 142 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 CD247P20963 164 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 GTF2E2P29084 291 aaKnown RBP9.61□□□□□ -0.87
UBR4-208ENST00000459947 FAM162AQ96A26 154 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 HS6ST2Q96MM7 605 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 SLC19A3Q9BZV2 496 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 PCDHAC1Q9H158 963 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 OR10A4Q9H209 315 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 C1orf21Q9H246 121 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 ADA2Q9NZK5 511 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 ZNF462Q96JM2 2506 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 A0A0J9YW62 118 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 CXCL13O43927 109 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 SS18L1O75177 396 aaPredicted RBP9.61□□□□□ -0.87
UBR4-208ENST00000459947 IL11P20809 199 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 TCEA1P23193 301 aaKnown RBP9.61□□□□□ -0.87
UBR4-208ENST00000459947 AGFG1P52594 562 aaKnown RBP9.61□□□□□ -0.87
UBR4-208ENST00000459947 ZNF239Q16600 458 aaKnown RBP9.61□□□□□ -0.87
UBR4-208ENST00000459947 TMEM201Q5SNT2 666 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 OLIG3Q7RTU3 272 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 GEMIN6Q8WXD5 167 aaKnown RBP9.61□□□□□ -0.87
UBR4-208ENST00000459947 OR5B2Q96R09 309 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 MCHR1Q99705 422 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 SLC39A3Q9BRY0 314 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 TMEM43Q9BTV4 400 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 TRIM15Q9C019 465 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 NDEL1Q9GZM8 345 aa9.61□□□□□ -0.87
UBR4-208ENST00000459947 NCOA6Q14686 2063 aaPredicted RBP9.61□□□□□ -0.87
UBR4-208ENST00000459947 A0A0G2JNJ9 132 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 TRAPPC13A5PLN9 417 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 ZNF724A8MTY0 619 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 OR5F1O95221 314 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 IGF2P01344 180 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 CD8BP10966 210 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 SORDQ00796 357 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 CTU2Q2VPK5 515 aaKnown RBP9.6□□□□□ -0.87
UBR4-208ENST00000459947 FCRLAQ7L513 359 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 TRPM8Q7Z2W7 1104 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 ADGRG3Q86Y34 549 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 CLIP4Q8N3C7 705 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 MARVELD2Q8N4S9 558 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 ADPRHL1Q8NDY3 354 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 RNASE6Q93091 150 aaKnown RBP9.6□□□□□ -0.87
UBR4-208ENST00000459947 ZNF845Q96IR2 970 aaPredicted RBP9.6□□□□□ -0.87
UBR4-208ENST00000459947 SPOCK3Q9BQ16 436 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 SF3B5Q9BWJ5 86 aaKnown RBP9.6□□□□□ -0.87
UBR4-208ENST00000459947 ELOVL5Q9NYP7 299 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 Q9UFV3 132 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 TMEM229AB2RXF0 380 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 FZD7O75084 574 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 WISP2O76076 250 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 PRKD3O94806 890 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 FESP07332 822 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 SFTPDP35247 375 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 PON3Q15166 354 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 TOMM34Q15785 309 aaPredicted RBP9.6□□□□□ -0.87
UBR4-208ENST00000459947 NPTX1Q15818 432 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 IFI44LQ53G44 452 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 CYBRD1Q53TN4 286 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 ATG4DQ86TL0 474 aaPredicted RBP9.6□□□□□ -0.87
UBR4-208ENST00000459947 MFSD8Q8NHS3 518 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 RNF128Q8TEB7 428 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 FIG4Q92562 907 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 C3orf49Q96BT1 292 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 TAMM41Q96BW9 452 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 PSMG3-AS1Q96PY0 264 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 ARL8BQ9NVJ2 186 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 PROCRQ9UNN8 238 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 CORINQ9Y5Q5 1042 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 FREM2Q5SZK8 3169 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 OR6C65A6NJZ3 312 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 B4DXG7 233 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 NME4O00746 187 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 TNFSF11O14788 317 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 CHP2O43745 196 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 RBM34P42696 430 aaKnown RBP9.6□□□□□ -0.87
UBR4-208ENST00000459947 CLDN20P56880 219 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 SRSF1Q07955 248 aaKnown RBP eCLIP9.6□□□□□ -0.87
UBR4-208ENST00000459947 C9orf106Q8NAJ2 232 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 OR5M1Q8NGP8 315 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 COQ10BQ9H8M1 238 aa9.6□□□□□ -0.87
UBR4-208ENST00000459947 A0A1W2PNV4 684 aa9.59□□□□□ -0.87
UBR4-208ENST00000459947 ITGA2P17301 1181 aa9.59□□□□□ -0.87
UBR4-208ENST00000459947 GGT1P19440 569 aa9.59□□□□□ -0.87
UBR4-208ENST00000459947 AQP1P29972 269 aa9.59□□□□□ -0.87
UBR4-208ENST00000459947 OR2B6P58173 313 aa9.59□□□□□ -0.87
UBR4-208ENST00000459947 SMIM11AP58511 58 aa9.59□□□□□ -0.87
UBR4-208ENST00000459947 SELENOWP63302 87 aa9.59□□□□□ -0.87
UBR4-208ENST00000459947 LRRC23Q53EV4 343 aaPredicted RBP9.59□□□□□ -0.87
UBR4-208ENST00000459947 RASD1Q9Y272 281 aa9.59□□□□□ -0.87
UBR4-208ENST00000459947 SNX13Q9Y5W8 968 aa9.59□□□□□ -0.87
UBR4-208ENST00000459947 TRAV36DV7A0A075B6V5 113 aa9.59□□□□□ -0.87
UBR4-208ENST00000459947 A0A1B0GWA3 101 aa9.59□□□□□ -0.87
UBR4-208ENST00000459947 PRSS44E7EML9 344 aa9.59□□□□□ -0.87
UBR4-208ENST00000459947 CYTIPO60759 359 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms