RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 EGFP01133 1207 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 CSF2P04141 144 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 IFNA16P05015 189 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 TACSTD2P09758 323 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 UCHL1P09936 223 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 GKN3PP0CG01 181 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 CHRNB1P11230 501 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 CTSEP14091 401 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF19P17023 458 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 COL9A1P20849 921 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 CD79BP40259 229 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 ADH7P40394 386 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 SOX9P48436 509 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 CENPAP49450 140 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 GDI2P50395 445 aaKnown RBP8.15□□□□□ -1.1
HDAC3-202ENST00000459727 TPMTP51580 245 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 NKX2-5P52952 324 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-202ENST00000459727 SLC25A1P53007 311 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 HSD17B7P56937 341 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 FXYD6P3P58550 94 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 HTR4Q13639 388 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 CDK5R1Q15078 307 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 P2RY14Q15391 338 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 TCTE1Q5JU00 501 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 UBE2NLQ5JXB2 153 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 FAM69AQ5T7M9 428 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 CD276Q5ZPR3 534 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 KIAA0895LQ68EN5 471 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 FIGNL1Q6PIW4 674 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 WDR88Q6ZMY6 472 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 Q6ZSR6 202 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 SPRED2Q7Z698 418 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 FGD2Q7Z6J4 655 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 MEX3DQ86XN8 651 aaKnown RBP8.15□□□□□ -1.1
HDAC3-202ENST00000459727 OR4N5Q8IXE1 308 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 SLC35F2Q8IXU6 374 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 SLC35F3Q8IY50 421 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 OR4N4Q8N0Y3 316 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 CARFQ8N187 725 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 GHDCQ8N2G8 530 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 FAM109AQ8N4B1 249 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 C19orf47Q8N9M1 422 aaKnown RBP8.15□□□□□ -1.1
HDAC3-202ENST00000459727 OR4M1Q8NGD0 313 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 GRHL3Q8TE85 626 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 SNX33Q8WV41 574 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 LIPHQ8WWY8 451 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 JPH3Q8WXH2 748 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-202ENST00000459727 PTP4A1Q93096 173 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 ANKRD9Q96BM1 317 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-202ENST00000459727 TCTN2Q96GX1 697 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 PGLYRP3Q96LB9 341 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 VSTM2LQ96N03 204 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 ERMAPQ96PL5 475 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-202ENST00000459727 GDF15Q99988 308 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 CHRNA10Q9GZZ6 450 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 MED28Q9H204 178 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 ABCG5Q9H222 651 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 IGFLR1Q9H665 355 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 SYNPO2LQ9H987 977 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 ISG20L2Q9H9L3 353 aaKnown RBP8.15□□□□□ -1.1
HDAC3-202ENST00000459727 TMEM165Q9HC07 324 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 MCCC2Q9HCC0 563 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 RANGRFQ9HD47 186 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-202ENST00000459727 EMC7Q9NPA0 242 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 B3GAT2Q9NPZ5 323 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 ATP13A2Q9NQ11 1180 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 NRIP3Q9NQ35 241 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 MEPEQ9NQ76 525 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-202ENST00000459727 KLHL1Q9NR64 748 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 C20orf141Q9NUB4 165 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 PAQR5Q9NXK6 330 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-202ENST00000459727 NLKQ9UBE8 527 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 CHRNA9Q9UGM1 479 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 SPATA2Q9UM82 520 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 RASD1Q9Y272 281 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 RBMX2Q9Y388 322 aaKnown RBP8.15□□□□□ -1.1
HDAC3-202ENST00000459727 ETV7Q9Y603 341 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 PLXND1Q9Y4D7 1925 aa8.15□□□□□ -1.11
HDAC3-202ENST00000459727 A0A0G2JMP0 313 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 A0A0X1KG70 313 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 SERINC4A6NH21 518 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 ZNF860A6NHJ4 632 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 LILRA5A6NI73 299 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 SLC9B1P1A6NJY1 282 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 C10orf142B7Z368 130 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 NPIPB9F8W1W9 429 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 H0YIG0 161 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 FZD7O75084 574 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 LDOC1O95751 146 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-202ENST00000459727 CSTAP01040 98 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 RAB40ALP0C0E4 278 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 ANXA3P12429 323 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 TCEA1P23193 301 aaKnown RBP8.14□□□□□ -1.11
HDAC3-202ENST00000459727 AHCYP23526 432 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 SSTR4P31391 388 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 PYCR1P32322 319 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 THBS2P35442 1172 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 RPL4P36578 427 aaKnown RBP8.14□□□□□ -1.11
HDAC3-202ENST00000459727 ACAA2P42765 397 aaKnown RBP8.14□□□□□ -1.11
HDAC3-202ENST00000459727 GRK6P43250 576 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms