RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ITGA5P08648 1049 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 UBTFL6P0CB48 400 aaPredicted RBP9.15□□□□□ -0.94
HDLBP-227ENST00000458564 SRD5A1P18405 259 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 KRT4P19013 534 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 PRPS1L1P21108 318 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 IGFBP5P24593 272 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 NTF4P34130 210 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 APOBEC1P41238 236 aaKnown RBP9.15□□□□□ -0.94
HDLBP-227ENST00000458564 CLK1P49759 484 aaKnown RBP9.15□□□□□ -0.94
HDLBP-227ENST00000458564 GZMKP49863 264 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 FABP6P51161 128 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 HBA1P69905 142 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 H3F3AP84243 136 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 CHRNEQ04844 493 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 ARHGAP11BQ3KRB8 267 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 ATP6AP1LQ52LC2 224 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 EIF3MQ7L2H7 374 aaKnown RBP9.15□□□□□ -0.94
HDLBP-227ENST00000458564 UBE2J2Q8N2K1 259 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 OR5AK3PQ8NH89 298 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 MIPOL1Q8TD10 442 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 HTRA1Q92743 480 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 PRPF18Q99633 342 aaKnown RBP9.15□□□□□ -0.94
HDLBP-227ENST00000458564 C19orf24Q9BVV8 132 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 FKRPQ9H9S5 495 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 MKS1Q9NXB0 559 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 DCTN4Q9UJW0 460 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 SLC35A3Q9Y2D2 325 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 TRAF6Q9Y4K3 522 aa9.15□□□□□ -0.94
HDLBP-227ENST00000458564 MALRD1Q5VYJ5 2156 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 NUP214P35658 2090 aaPredicted RBP9.14□□□□□ -0.95
HDLBP-227ENST00000458564 M0R1B8 84 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 FCMRO60667 390 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 PEX11AO75192 247 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 MRPL33O75394 65 aaKnown RBP9.14□□□□□ -0.95
HDLBP-227ENST00000458564 SHBGP04278 402 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 APOBEC3AP31941 199 aaPredicted RBP9.14□□□□□ -0.95
HDLBP-227ENST00000458564 PGM1P36871 562 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 RPS26P62854 115 aaKnown RBP9.14□□□□□ -0.95
HDLBP-227ENST00000458564 LSM11P83369 360 aaKnown RBP eCLIP9.14□□□□□ -0.95
HDLBP-227ENST00000458564 CHRNB3Q05901 458 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 GPR68Q15743 365 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 C6orf136Q5SQH8 315 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 FAM166AQ6J272 317 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 GRINAQ7Z429 371 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 KRTCAP2Q8N6L1 136 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 WDR31Q8NA23 367 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 BOD1Q96IK1 185 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 ARL5BQ96KC2 179 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 DUSP26Q9BV47 211 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 EML4Q9HC35 981 aaKnown RBP9.14□□□□□ -0.95
HDLBP-227ENST00000458564 EXOSC3Q9NQT5 275 aaKnown RBP9.14□□□□□ -0.95
HDLBP-227ENST00000458564 CTPS2Q9NRF8 586 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 POLE3Q9NRF9 147 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 GIMAP2Q9UG22 337 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 MKLN1Q9UL63 735 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 KCNS2Q9ULS6 477 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 TRAPPC4Q9Y296 219 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 SLC9A8Q9Y2E8 581 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 AMDHD2Q9Y303 409 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 PMF1-BGLAPU3KQ54 211 aa9.14□□□□□ -0.95
HDLBP-227ENST00000458564 ARFGEF3Q5TH69 2177 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 RNF103-CHMP3A0A140T963 221 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 A0A1W2PR80 420 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 CFLARO15519 480 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 BCAS1O75363 584 aaPredicted RBP9.13□□□□□ -0.95
HDLBP-227ENST00000458564 CYP7B1O75881 506 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 TFPIP10646 304 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 MATN1P21941 496 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 SOAT1P35610 550 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 SERPINB5P36952 375 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 NR4A2P43354 598 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 MAGEA8P43361 318 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 FOXG1P55316 489 aaPredicted RBP9.13□□□□□ -0.95
HDLBP-227ENST00000458564 PHC1P78364 1004 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 SLC25A3Q00325 362 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 TGFBR3Q03167 851 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 PLAURQ03405 335 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 MAPK14Q16539 360 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 SWI5Q1ZZU3 235 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 IL23RQ5VWK5 629 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 EMBQ6PCB8 327 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 CASP12Q6UXS9 341 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 C6orf120Q7Z4R8 191 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 C4orf33Q8N1A6 199 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 ARIH2OSQ8N7S6 290 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 EIF1ADQ8N9N8 165 aaKnown RBP9.13□□□□□ -0.95
HDLBP-227ENST00000458564 FNDC5Q8NAU1 212 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 C3orf30Q96M34 536 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 C1orf50Q9BV19 199 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 SAP130Q9H0E3 1048 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 MYOZ1Q9NP98 299 aaPredicted RBP9.13□□□□□ -0.95
HDLBP-227ENST00000458564 SLC17A5Q9NRA2 495 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 EXD2Q9NVH0 621 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 PARPBPQ9NWS1 579 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 ASIC5Q9NY37 505 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 TMEM181Q9P2C4 612 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 FKBP7Q9Y680 259 aa9.13□□□□□ -0.95
HDLBP-227ENST00000458564 RNASET2O00584 256 aaKnown RBP9.12□□□□□ -0.95
HDLBP-227ENST00000458564 EIF1BO60739 113 aaKnown RBP9.12□□□□□ -0.95
HDLBP-227ENST00000458564 LY6HO94772 140 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms