RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 C16orf78Q8WTQ4 265 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 PHF10Q8WUB8 498 aaKnown RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 PIH1D2Q8WWB5 315 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 LINC00476Q8WZB0 136 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 ST8SIA1Q92185 356 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 CNOT9Q92600 299 aaKnown RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 RAD54LQ92698 747 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 CDS1Q92903 461 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 TMEM45BQ96B21 275 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 C12orf43Q96C57 262 aaKnown RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 BIRC7Q96CA5 298 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 L3HYPDHQ96EM0 354 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 PPP3R2Q96LZ3 170 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 LGMNQ99538 433 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 IL12RB2Q99665 862 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 RBBP8Q99708 897 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 SYT15Q9BQS2 421 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 ZNF426Q9BUY5 554 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 MRI1Q9BV20 369 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 TMEM109Q9BVC6 243 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 RBM24Q9BX46 236 aaKnown RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 ERVK-6Q9BXR3 956 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 ULBP2Q9BZM5 246 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 CTDSP1Q9GZU7 261 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 MS4A7Q9GZW8 240 aaPredicted RBP4.96□□□□□ -1.62
VPS41-209ENST00000457055 SLC25A32Q9H2D1 315 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 EPHX3Q9H6B9 360 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 MANSC1Q9H8J5 431 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 TRIM36Q9NQ86 728 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 BIN3Q9NQY0 253 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 THSD1Q9NS62 852 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 BABAM2Q9NXR7 383 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 GPR83Q9NYM4 423 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 PAK5Q9P286 719 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 PEMTQ9UBM1 199 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 DKK2Q9UBU2 259 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 HSPB7Q9UBY9 170 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 CD207Q9UJ71 328 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 SLC27A6Q9Y2P4 619 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 KCNIP3Q9Y2W7 256 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 ACTL7AQ9Y615 435 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 ARL5AQ9Y689 179 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 COX11Q9Y6N1 276 aa4.96□□□□□ -1.62
VPS41-209ENST00000457055 CD163L1Q9NR16 1453 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 LOC105369274A0A096LPK9 316 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 LOC102723532A0A0G2JNH3 316 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 TRBV7-9A0A0J9YWB2 115 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 A0A1B0GTI1 187 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 A0A1B0GVL5 298 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 WIPF3A6NGB9 483 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 AGAP5A6NIR3 686 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 PP2D1A8MPX8 630 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 E7EWF7 191 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 TSTD3H0UI37 97 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 M0QYV0 167 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 F2RL2O00254 374 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SLC28A1O00337 649 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SLC16A4O15374 487 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 ADAM12O43184 909 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 B4GALT5O43286 388 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 KIAA0513O60268 411 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 PLIN3O60664 434 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 AQP8O94778 261 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 ZWINTO95229 277 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 CST1P01037 141 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 TCRBP04435 133 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 HLA-DOAP06340 250 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SERPINE2P07093 398 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 KCNE1P15382 129 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 ATP6V1B2P21281 511 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 BGNP21810 368 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 PAX6P26367 422 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 ECHS1P30084 290 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 PLA2G5P39877 138 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 RPL35P42766 123 aaKnown RBP4.95□□□□□ -1.62
VPS41-209ENST00000457055 UQCRFS1P47985 274 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 GABRA4P48169 554 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 RPL19P84098 196 aaKnown RBP4.95□□□□□ -1.62
VPS41-209ENST00000457055 DHODHQ02127 395 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 MBTD1Q05BQ5 628 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 PTGES3Q15185 160 aaKnown RBP4.95□□□□□ -1.62
VPS41-209ENST00000457055 SPA17Q15506 151 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 ZBTB6Q15916 424 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 HLFQ16534 295 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SPIN3Q5JUX0 258 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 ABHD17BQ5VST6 288 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 LPCAT4Q643R3 524 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SLC8B1Q6J4K2 584 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 APOBEC3HQ6NTF7 200 aaKnown RBP4.95□□□□□ -1.62
VPS41-209ENST00000457055 ADAM5Q6NVV9 412 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 RGMBQ6NW40 437 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 ANGPTL5Q86XS5 388 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 TRAPPC5Q8IUR0 188 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 NRMQ8IXM6 262 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.95□□□□□ -1.62
VPS41-209ENST00000457055 CMTM8Q8IZV2 173 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 OR4N4Q8N0Y3 316 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 LRRC18Q8N456 261 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 HORMAD2Q8N7B1 307 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 WDSUB1Q8N9V3 476 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms