RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 IGHA1P01876 353 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 SRFP11831 508 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 GIFP27352 417 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 SLC6A1P30531 599 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 PPM1FP49593 454 aaPredicted RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 FGFBP1Q14512 234 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 EXOSC7Q15024 291 aaKnown RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 LRRC25Q8N386 305 aaPredicted RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 OR5J2Q8NH18 312 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 GRHL3Q8TE85 626 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 PIGKQ92643 395 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 RERGQ96A58 199 aaPredicted RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 RFT1Q96AA3 541 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 ADAP2Q9NPF8 381 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 COLQQ9Y215 455 aaPredicted RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 IGHV1OR15-9A0A0B4J2B8 117 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 DAPL1A0PJW8 107 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 C2orf74A8MZ97 194 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 IMPA2O14732 288 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 RGS9O75916 674 aaPredicted RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 MT-ND4P03905 459 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 FPR3P25089 353 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 ANXA11P50995 505 aaKnown RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 TDGQ13569 410 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 NTRK2Q16620 822 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 DUSP5Q16690 384 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 PUS10Q3MIT2 529 aaKnown RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 PLA1AQ53H76 456 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 SFXN4Q6P4A7 337 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 OR4K14Q8NGD5 310 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 OR9A4Q8NGU2 314 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 OR5W2Q8NH69 310 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 TRMT10AQ8TBZ6 339 aaKnown RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 SFXN5Q8TD22 340 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 ADAMTS15Q8TE58 950 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 OSTF1Q92882 214 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 PTP4A1Q93096 173 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 KISS1RQ969F8 398 aaPredicted RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 RFKQ969G6 155 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 C4orf36Q96KX1 117 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 HEXA-AS1Q9H8Q6 139 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 POT1Q9NUX5 634 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 LYARQ9NX58 379 aaKnown RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 ASCC3Q8N3C0 2202 aaKnown RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 KLF4O43474 513 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 RDH16O75452 317 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 RFPL3O75679 317 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 PAICSP22234 425 aaKnown RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 C19orf57Q0VDD7 668 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 TMEM255AQ5JRV8 349 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 STPG1Q5TH74 334 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 NIPAL3Q6P499 406 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 DGAT2L6Q6ZPD8 337 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 SYT13Q7L8C5 426 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 CSNK1A1LQ8N752 337 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 FANK1Q8TC84 345 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 SERINC2Q96SA4 455 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 MED28Q9H204 178 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 BABAM2Q9NXR7 383 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 ZNF443Q9Y2A4 671 aaPredicted RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 EXOGQ9Y2C4 368 aaKnown RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 SLC22A7Q9Y694 548 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 J3QRE1 110 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 PSMD9O00233 223 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 CHST10O43529 356 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 SLC34A2O95436 690 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 HPXP02790 462 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 CT62P0C5K7 136 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 CRYZQ08257 329 aaKnown RBP11.44□□□□□ -0.58
LINC00959-201ENST00000456581 SMAD4Q13485 552 aaKnown RBP11.44□□□□□ -0.58
LINC00959-201ENST00000456581 ERV3-1Q14264 604 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 CEBPEQ15744 281 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 GXYLT1Q4G148 440 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 MZT2AQ6P582 158 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 FIGNL1Q6PIW4 674 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 MBOAT2Q6ZWT7 520 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 PLCZ1Q86YW0 608 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 METTL27Q8N6F8 245 aaPredicted RBP11.44□□□□□ -0.58
LINC00959-201ENST00000456581 ACBD7Q8N6N7 88 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 CAMKVQ8NCB2 501 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 OR5M3Q8NGP4 307 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 THAP4Q8WY91 577 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 MED30Q96HR3 178 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 ZNF559Q9BR84 538 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 TWSG1Q9GZX9 223 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 AUNIPQ9H7T9 357 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 KCNE5Q9UJ90 142 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 CNTRLQ7Z7A1 2325 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 A0A0G2JK05 382 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 A0A0J9YY10 115 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 OR5K3A6NET4 321 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 CPMP14384 443 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 IFNGR2P38484 337 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 TSFMP43897 325 aaKnown RBP11.44□□□□□ -0.58
LINC00959-201ENST00000456581 CCR5P51681 352 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 ZNF136P52737 540 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 SLC36A2Q495M3 483 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 MFSD12Q6NUT3 480 aa11.44□□□□□ -0.58
LINC00959-201ENST00000456581 PARGQ86W56 976 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms