RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 TAF10Q12962 218 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM185AQ8NFB2 350 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 OR4Q3Q8NH05 313 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 A0A1W2PPV4 95 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 CASTOR2A6NHX0 329 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 E7EQ34 232 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 SGK494L7N484 410 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 HRO43593 1189 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 CT45A10P0DMU9 189 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 SELPP16109 830 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 ITGB5P18084 799 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 ZP2Q05996 745 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 MADCAM1Q13477 382 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 MIDNQ504T8 468 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 OPN5Q6U736 354 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 SBSNQ6UWP8 590 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 CPNE8Q86YQ8 564 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 ECHDC3Q96DC8 303 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 RTL8AQ9BWD3 113 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 ADAM33Q9BZ11 813 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 NXF2Q9GZY0 626 aaKnown RBP4.9□□□□□ -1.62
CSMD3-204ENST00000455883 PPIL3Q9H2H8 161 aaKnown RBP4.9□□□□□ -1.62
CSMD3-204ENST00000455883 TMPRSS4Q9NRS4 437 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 GSKIPQ9P0R6 139 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 MMACHCQ9Y4U1 282 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 HAS3O00219 553 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 SIAH2O43255 324 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 OR4F21O95013 312 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 CNOT4O95628 575 aaKnown RBP4.9□□□□□ -1.62
CSMD3-204ENST00000455883 ACRV1P26436 265 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 PBX2P40425 430 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 PCGF3Q3KNV8 242 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF695Q8IW36 515 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 SLC38A6Q8IZM9 456 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 ARRDC1Q8N5I2 433 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 UBTD2Q8WUN7 234 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 UCN3Q969E3 161 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 VNN3Q9NY84 501 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 FAM149AA5PLN7 773 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 FAM221BA6H8Z2 402 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 NPIPB15A6NHN6 443 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-204ENST00000455883 ERI3O43414 337 aaKnown RBP4.9□□□□□ -1.62
CSMD3-204ENST00000455883 CTSHP09668 335 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 CCKARP32238 428 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 CASP7P55210 303 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 GRB2P62993 217 aaKnown RBP4.9□□□□□ -1.62
CSMD3-204ENST00000455883 TOMM34Q15785 309 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-204ENST00000455883 GRIK5Q16478 980 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 Q499Y3 187 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 HSF5Q4G112 596 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-204ENST00000455883 SLC5A8Q8N695 610 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 OR52B6Q8NGF0 335 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM163Q8TC26 289 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 SLC41A2Q96JW4 573 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 CARS2Q9HA77 564 aaKnown RBP4.9□□□□□ -1.62
CSMD3-204ENST00000455883 IL37Q9NZH6 218 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 STEAP1Q9UHE8 339 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 CIDEAO60543 219 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 HAND1O96004 215 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 TFAP2AP05549 437 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 SFTPBP07988 381 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 GSK3AP49840 483 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 TNFAIP8L2Q6P589 184 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM64Q6YI46 380 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 LANCL3Q6ZV70 420 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 RHOUQ7L0Q8 258 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 PGBD5Q8N414 524 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 FOXJ1Q92949 421 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 OR2A14Q96R47 310 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF300Q96RE9 604 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-204ENST00000455883 DPH2Q9BQC3 489 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-204ENST00000455883 OR8D2Q9GZM6 311 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 DNAJC15Q9Y5T4 150 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 FAM24AA6NFZ4 105 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 FDXRP22570 491 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF157P51786 506 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-204ENST00000455883 NXNL2Q5VZ03 156 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 OR10K2Q6IF99 312 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 APOBEC3HQ6NTF7 200 aaKnown RBP4.9□□□□□ -1.62
CSMD3-204ENST00000455883 TAS1R3Q7RTX0 852 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 GOLGA7Q7Z5G4 137 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 C1orf127Q8N9H9 656 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 SLAIN1Q8ND83 568 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 NUDT16L1Q9BRJ7 211 aaKnown RBP4.9□□□□□ -1.62
CSMD3-204ENST00000455883 ADAM7Q9H2U9 754 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 CAPN10Q9HC96 672 aa4.9□□□□□ -1.62
CSMD3-204ENST00000455883 B4DXG7 233 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 CPNE6O95741 557 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 CSTAP01040 98 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 TNFP01375 233 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 OR4E1P0C645 316 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 NOVA1P51513 510 aaKnown RBP4.9□□□□□ -1.63
CSMD3-204ENST00000455883 EFNA3P52797 238 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 EXT1Q16394 746 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 CTSL3PQ5NE16 218 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 CNKSR3Q6P9H4 555 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 OR6K3Q8NGY3 331 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 SIRT7Q9NRC8 400 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 SPHK1Q9NYA1 384 aa4.9□□□□□ -1.63
CSMD3-204ENST00000455883 GPSM3Q9Y4H4 160 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms