RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 GTF2IRD2Q86UP8 949 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 TMEM200AQ86VY9 491 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 ADGRG3Q86Y34 549 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 CLIP4Q8N3C7 705 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 ATP6V1C2Q8NEY4 427 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 FAM222BQ8WU58 562 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 GALNT8Q9NY28 637 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 EMC9Q9Y3B6 208 aa15.49■□□□□ 0.07
USP39-208ENST00000455732 FREM1Q5H8C1 2179 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 A0A1W2PNR3 127 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 ZNF208O43345 1280 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 PLGP00747 810 aaPredicted RBP15.48■□□□□ 0.07
USP39-208ENST00000455732 NPPAP01160 153 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 SLC6A2P23975 617 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 MTPNP58546 118 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 CSNK2A1P68400 391 aaPredicted RBP15.48■□□□□ 0.07
USP39-208ENST00000455732 SF3A3Q12874 501 aaKnown RBP eCLIP15.48■□□□□ 0.07
USP39-208ENST00000455732 DHRS4L2Q6PKH6 230 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 TMPPEQ6ZT21 453 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 FCRLAQ7L513 359 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 CDH24Q86UP0 819 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 KRT73Q86Y46 540 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 SLC43A2Q8N370 569 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 C11orf65Q8NCR3 313 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 HIPK4Q8NE63 616 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 REXO5Q96IC2 774 aaKnown RBP15.48■□□□□ 0.07
USP39-208ENST00000455732 OR5B2Q96R09 309 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 SPATA5L1Q9BVQ7 753 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 ADAM19Q9H013 955 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 KAT8Q9H7Z6 458 aaKnown RBP15.48■□□□□ 0.07
USP39-208ENST00000455732 OSGIN1Q9UJX0 560 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 PROCRQ9UNN8 238 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 HDGFL3Q9Y3E1 203 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 CAPN7Q9Y6W3 813 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 C2CD3Q4AC94 2353 aa15.48■□□□□ 0.07
USP39-208ENST00000455732 HIVEP1P15822 2718 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 TMED7-TICAM2A0A0A6YYA0 188 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 TUBAL3A6NHL2 446 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 FXYD1O00168 92 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 DNPH1O43598 174 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 SMNDC1O75940 238 aaKnown RBP eCLIP15.47■□□□□ 0.07
USP39-208ENST00000455732 PMS2P2O95744 297 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 GKN3PP0CG01 181 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 TACR3P29371 465 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 AGTR1P30556 359 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 DIO1P49895 249 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 CTBP2P56545 445 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 RIPPLY3P57055 190 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 SELPLGQ14242 412 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 DAZAP2Q15038 168 aaPredicted RBP15.47■□□□□ 0.07
USP39-208ENST00000455732 ZNF474Q6S9Z5 364 aaPredicted RBP15.47■□□□□ 0.07
USP39-208ENST00000455732 SERPINA11Q86U17 422 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 PTOV1Q86YD1 416 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 ABHD3Q8WU67 409 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 ROBO4Q8WZ75 1007 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 TACO1Q9BSH4 297 aaKnown RBP15.47■□□□□ 0.07
USP39-208ENST00000455732 OPN3Q9H1Y3 402 aaPredicted RBP15.47■□□□□ 0.07
USP39-208ENST00000455732 PLSCR4Q9NRQ2 329 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 KLHL13Q9P2N7 655 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 ITGB1BP2Q9UKP3 347 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 CLEC4AQ9UMR7 237 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 ANGPT4Q9Y264 503 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 TMED7Q9Y3B3 224 aa15.47■□□□□ 0.07
USP39-208ENST00000455732 MAP1AP78559 2803 aaPredicted RBP15.47■□□□□ 0.07
USP39-208ENST00000455732 PRORSD1PA6NEY8 169 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 A6NNC1 897 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 EPXP11678 715 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 ENPP1P22413 925 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 CPOXP36551 454 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 PCBP3P57721 371 aaKnown RBP15.46■□□□□ 0.07
USP39-208ENST00000455732 COPZ1P61923 177 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 CYLC2Q14093 348 aaPredicted RBP15.46■□□□□ 0.07
USP39-208ENST00000455732 CAPRIN1Q14444 709 aaKnown RBP15.46■□□□□ 0.07
USP39-208ENST00000455732 CYP51A1Q16850 503 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 REP15Q6BDI9 236 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 WBP2NLQ6ICG8 309 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 SNX32Q86XE0 403 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 SLC30A8Q8IWU4 369 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 BHLHE22Q8NFJ8 381 aaPredicted RBP15.46■□□□□ 0.07
USP39-208ENST00000455732 OR8J3Q8NGG0 315 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 LINC01560Q8TB33 94 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 ARL5BQ96KC2 179 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 ZNF607Q96SK3 696 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 SH3GL1Q99961 368 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 GPATCH1Q9BRR8 931 aaKnown RBP15.46■□□□□ 0.07
USP39-208ENST00000455732 RSPO3Q9BXY4 272 aaPredicted RBP15.46■□□□□ 0.07
USP39-208ENST00000455732 RASSF1Q9NS23 344 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 ELOVL5Q9NYP7 299 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 KLHL9Q9P2J3 617 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 TRAPPC4Q9Y296 219 aa15.46■□□□□ 0.07
USP39-208ENST00000455732 MED13LQ71F56 2210 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 SULT2B1O00204 365 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 DYNC1I1O14576 645 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 MRASO14807 208 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 SMAD9O15198 467 aaKnown RBP15.45■□□□□ 0.06
USP39-208ENST00000455732 CYTIPO60759 359 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 CCDC22O60826 627 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 PRKD3O94806 890 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 TFPIP10646 304 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 PRG2P13727 222 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms