RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 KCNJ16Q9NPI9 418 aa6.34□□□□□ -1.39
COMMD1-205ENST00000455659 TIGARQ9NQ88 270 aa6.34□□□□□ -1.39
COMMD1-205ENST00000455659 NPDC1Q9NQX5 325 aaPredicted RBP6.34□□□□□ -1.39
COMMD1-205ENST00000455659 CTPS2Q9NRF8 586 aa6.34□□□□□ -1.39
COMMD1-205ENST00000455659 KLHL28Q9NXS3 571 aa6.34□□□□□ -1.39
COMMD1-205ENST00000455659 TESQ9UGI8 421 aaKnown RBP6.34□□□□□ -1.39
COMMD1-205ENST00000455659 PACSIN3Q9UKS6 424 aa6.34□□□□□ -1.39
COMMD1-205ENST00000455659 ZNF232Q9UNY5 417 aa6.34□□□□□ -1.39
COMMD1-205ENST00000455659 CHST2Q9Y4C5 530 aa6.34□□□□□ -1.39
COMMD1-205ENST00000455659 SPG11Q96JI7 2443 aa6.34□□□□□ -1.4
COMMD1-205ENST00000455659 TMED7-TICAM2A0A0A6YYA0 188 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 IGHV3-15A0A0B4J1V0 119 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 CCT8L1PA6NM43 557 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 M0R3H8 397 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 SHOX2O60902 331 aaPredicted RBP6.33□□□□□ -1.4
COMMD1-205ENST00000455659 TNFSF13O75888 250 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 SMNDC1O75940 238 aaKnown RBP eCLIP6.33□□□□□ -1.4
COMMD1-205ENST00000455659 AQP8O94778 261 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 RCBTB2O95199 551 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 FAM107AO95990 144 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 IL18BPO95998 194 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 FESP07332 822 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 PRG2P13727 222 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 CCNA2P20248 432 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 HTR2AP28223 471 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 TACR3P29371 465 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 PRDX6P30041 224 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 UQCRC1P31930 480 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 APOBEC1P41238 236 aaKnown RBP6.33□□□□□ -1.4
COMMD1-205ENST00000455659 SLC1A3P43003 542 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 SLC7A2P52569 658 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 AGFG1P52594 562 aaKnown RBP6.33□□□□□ -1.4
COMMD1-205ENST00000455659 CSNK2A1P68400 391 aaPredicted RBP6.33□□□□□ -1.4
COMMD1-205ENST00000455659 HOXC5Q00444 222 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 DMTNQ08495 405 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 FOXF2Q12947 444 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 MYBPHQ13203 477 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 VMACQ2NL98 169 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 GLIPR1L2Q4G1C9 344 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 GKAP1Q5VSY0 366 aaPredicted RBP6.33□□□□□ -1.4
COMMD1-205ENST00000455659 ZNF787Q6DD87 383 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 WBP2NLQ6ICG8 309 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 VWA1Q6PCB0 445 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 HACD2Q6Y1H2 254 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 MEX3BQ6ZN04 569 aaKnown RBP6.33□□□□□ -1.4
COMMD1-205ENST00000455659 PATL1Q86TB9 770 aaKnown RBP6.33□□□□□ -1.4
COMMD1-205ENST00000455659 LUZP2Q86TE4 346 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 RANBP3LQ86VV4 465 aaPredicted RBP6.33□□□□□ -1.4
COMMD1-205ENST00000455659 MCEMP1Q8IX19 187 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 OR2T12Q8NG77 320 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 SLC26A7Q8TE54 656 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 ABHD3Q8WU67 409 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 SLC35B4Q969S0 331 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 TAMM41Q96BW9 452 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 DDIT4LQ96D03 193 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 ZHX1-C8orf76Q96EF9 292 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 LRRC46Q96FV0 321 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 LRRC37BQ96QE4 947 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 OR11A1Q9GZK7 315 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 SPAG4Q9NPE6 437 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 RPS6KB2Q9UBS0 482 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 ZNF629Q9UEG4 869 aaPredicted RBP6.33□□□□□ -1.4
COMMD1-205ENST00000455659 OSGIN1Q9UJX0 560 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 CLEC4AQ9UMR7 237 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 USP22Q9UPT9 525 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 AP3M1Q9Y2T2 418 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 TMED7Q9Y3B3 224 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 EMC9Q9Y3B6 208 aa6.33□□□□□ -1.4
COMMD1-205ENST00000455659 A0A1B0GWA3 101 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 TMEM72A0PK05 275 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 ZC3H12DA2A288 527 aaKnown RBP6.32□□□□□ -1.4
COMMD1-205ENST00000455659 SYT5O00445 386 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 NME4O00746 187 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 SMAD9O15198 467 aaKnown RBP6.32□□□□□ -1.4
COMMD1-205ENST00000455659 ZNF208O43345 1280 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 HNRNPRO43390 633 aaKnown RBP6.32□□□□□ -1.4
COMMD1-205ENST00000455659 EFNA2O43921 213 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 SS18L1O75177 396 aaPredicted RBP6.32□□□□□ -1.4
COMMD1-205ENST00000455659 MFN2O95140 757 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 PMS2P2O95744 297 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 CRHP06850 196 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 IGFBP2P18065 325 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 ENPP1P22413 925 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 CXCR1P25024 350 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 GTF2E2P29084 291 aaKnown RBP6.32□□□□□ -1.4
COMMD1-205ENST00000455659 AGTR1P30556 359 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 IDUAP35475 653 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 ACAA2P42765 397 aaKnown RBP6.32□□□□□ -1.4
COMMD1-205ENST00000455659 DIO1P49895 249 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 GZMMP51124 257 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 CTBP2P56545 445 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 CARD18P57730 90 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 RNPS1Q15287 305 aaKnown RBP6.32□□□□□ -1.4
COMMD1-205ENST00000455659 GUSBP1Q15486 140 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 FBXL19-AS1Q494R0 122 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 ABLIM2Q6H8Q1 611 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 C6orf89Q6UWU4 347 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 FCRLAQ7L513 359 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 GDF7Q7Z4P5 450 aa6.32□□□□□ -1.4
COMMD1-205ENST00000455659 CALHM3Q86XJ0 350 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms