RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 RIPPLY3P57055 190 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 OR2B6P58173 313 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 PLAURQ03405 335 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 LARS2Q15031 903 aaKnown RBP9.49□□□□□ -0.89
DDX39A-203ENST00000454233 P2RY6Q15077 328 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 ACKR1Q16570 336 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 ZSWIM7Q19AV6 140 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 GTDC1Q4AE62 458 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 SFRP5Q5T4F7 317 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 ALKBH2Q6NS38 261 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 C20orf204Q6ZNR8 217 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 C22orf34Q6ZV56 151 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 GALNT5Q7Z7M9 940 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 ADGRG3Q86Y34 549 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 ZNF100Q8IYN0 542 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 OR52P1PQ8NH57 321 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 PIGXQ8TBF5 258 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 GTF2H4Q92759 462 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 KISS1RQ969F8 398 aaPredicted RBP9.49□□□□□ -0.89
DDX39A-203ENST00000454233 PIGTQ969N2 578 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 S100PBPQ96BU1 408 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 DDIT4LQ96D03 193 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 AURKBQ96GD4 344 aaPredicted RBP9.49□□□□□ -0.89
DDX39A-203ENST00000454233 HS3ST6Q96QI5 342 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 ZNF300Q96RE9 604 aaPredicted RBP9.49□□□□□ -0.89
DDX39A-203ENST00000454233 TMUB1Q9BVT8 246 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 ARMC7Q9H6L4 198 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 NGBQ9NPG2 151 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 INTS9Q9NV88 658 aaKnown RBP9.49□□□□□ -0.89
DDX39A-203ENST00000454233 PRDM4Q9UKN5 801 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 ZNF232Q9UNY5 417 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 TMED7Q9Y3B3 224 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 HRNRQ86YZ3 2850 aaPredicted RBP9.49□□□□□ -0.89
DDX39A-203ENST00000454233 ITPR3Q14573 2671 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 A0A096LPI6 279 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 A0A0G2JPF8 293 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 CDHR4A6H8M9 788 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 HNRNPCL2B2RXH8 293 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 HNRNPCL3B7ZW38 293 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 CLIC1O00299 241 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 NR5A2O00482 541 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 GPR171O14626 319 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 ARHGEF9O43307 516 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 ZNF208O43345 1280 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 KLF4O43474 513 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 HNRNPCL1O60812 293 aaKnown RBP9.48□□□□□ -0.89
DDX39A-203ENST00000454233 SMPD2O60906 423 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 ADAM11O75078 769 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 TFPTP0C1Z6 253 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 HNRNPCL4P0DMR1 293 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 TACR3P29371 465 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 AQP5P55064 265 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 COPZ1P61923 177 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 ADAM8P78325 824 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 IRX1P78414 480 aaPredicted RBP9.48□□□□□ -0.89
DDX39A-203ENST00000454233 EPS8Q12929 822 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 FADDQ13158 208 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 ITGADQ13349 1161 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 PDK3Q15120 406 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 RGNQ15493 299 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 ABLIM2Q6H8Q1 611 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 SLC2A7Q6PXP3 512 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 ZNF836Q6ZNA1 936 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 Q6ZT83 130 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 BHLHA15Q7RTS1 189 aaPredicted RBP9.48□□□□□ -0.89
DDX39A-203ENST00000454233 VRK2Q86Y07 508 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 SLC38A5Q8WUX1 472 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 HSD17B8Q92506 261 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 ZNF775Q96BV0 537 aaPredicted RBP9.48□□□□□ -0.89
DDX39A-203ENST00000454233 SPDL1Q96EA4 605 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 DNAJA3Q96EY1 480 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 PLPPR2Q96GM1 343 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 TMEM19Q96HH6 336 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 ARL5BQ96KC2 179 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 CCL19Q99731 98 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 PIP5K1AQ99755 562 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 EBF4Q9BQW3 602 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 NAA11Q9BSU3 229 aaPredicted RBP9.48□□□□□ -0.89
DDX39A-203ENST00000454233 OR11A1Q9GZK7 315 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 PAIP1Q9H074 479 aaKnown RBP9.48□□□□□ -0.89
DDX39A-203ENST00000454233 VIPAS39Q9H9C1 493 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 TMEM181Q9P2C4 612 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 OSGIN1Q9UJX0 560 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 ING1Q9UK53 422 aaPredicted RBP9.48□□□□□ -0.89
DDX39A-203ENST00000454233 TRAPPC4Q9Y296 219 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 ZNF443Q9Y2A4 671 aaPredicted RBP9.48□□□□□ -0.89
DDX39A-203ENST00000454233 NOSIPQ9Y314 301 aaKnown RBP9.48□□□□□ -0.89
DDX39A-203ENST00000454233 IFT52Q9Y366 437 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 PCDHB14Q9Y5E9 798 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 DSPPQ9NZW4 1301 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 CELSR1Q9NYQ6 3014 aa9.48□□□□□ -0.89
DDX39A-203ENST00000454233 IGKV3D-15A0A087WSY6 115 aa9.47□□□□□ -0.89
DDX39A-203ENST00000454233 TMEM72A0PK05 275 aa9.47□□□□□ -0.89
DDX39A-203ENST00000454233 ZNF814B7Z6K7 855 aa9.47□□□□□ -0.89
DDX39A-203ENST00000454233 C5orf58C9J3I9 102 aa9.47□□□□□ -0.89
DDX39A-203ENST00000454233 EIF1BO60739 113 aaKnown RBP9.47□□□□□ -0.89
DDX39A-203ENST00000454233 CNOT4O95628 575 aaKnown RBP9.47□□□□□ -0.89
DDX39A-203ENST00000454233 THBS1P07996 1170 aa9.47□□□□□ -0.89
DDX39A-203ENST00000454233 GKN3PP0CG01 181 aa9.47□□□□□ -0.89
DDX39A-203ENST00000454233 NCF2P19878 526 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms