RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ZNF300Q96RE9 604 aaPredicted RBP11.44□□□□□ -0.58
CHD3-206ENST00000452447 SLC38A1Q9H2H9 487 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 ESRP2Q9H6T0 727 aaKnown RBP11.44□□□□□ -0.58
CHD3-206ENST00000452447 TMBIM4Q9HC24 238 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 EMC3Q9P0I2 261 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 ING1Q9UK53 422 aaPredicted RBP11.44□□□□□ -0.58
CHD3-206ENST00000452447 HDGFL3Q9Y3E1 203 aa11.44□□□□□ -0.58
CHD3-206ENST00000452447 AGAP5A6NIR3 686 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 UBDO15205 165 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 PLAUP00749 431 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 CHRM4P08173 479 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 INHBBP09529 407 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 CLK1P49759 484 aaKnown RBP11.43□□□□□ -0.58
CHD3-206ENST00000452447 TAB1Q15750 504 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 GSTA3Q16772 222 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 SLC9B1Q4ZJI4 515 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 COX20Q5RI15 118 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 BEND6Q5SZJ8 279 aaPredicted RBP11.43□□□□□ -0.58
CHD3-206ENST00000452447 PRSS57Q6UWY2 283 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 DNAJC14Q6Y2X3 702 aaPredicted RBP11.43□□□□□ -0.58
CHD3-206ENST00000452447 BHLHA15Q7RTS1 189 aaPredicted RBP11.43□□□□□ -0.58
CHD3-206ENST00000452447 TMEM171Q8WVE6 324 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 WDR60Q8WVS4 1066 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 CNOT9Q92600 299 aaKnown RBP11.43□□□□□ -0.58
CHD3-206ENST00000452447 PMM1Q92871 262 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 TLCD1Q96CP7 247 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 POTEKPQ9BYX7 375 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 RMND5AQ9H871 391 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 ZIM2Q9NZV7 527 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 PRSS50Q9UI38 385 aa11.43□□□□□ -0.58
CHD3-206ENST00000452447 NSD1Q96L73 2696 aaPredicted RBP11.43□□□□□ -0.58
CHD3-206ENST00000452447 CLOCKO15516 846 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 ATP8B1O43520 1251 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 LYZL6O75951 148 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 CNOT4O95628 575 aaKnown RBP11.42□□□□□ -0.58
CHD3-206ENST00000452447 PMS2P2O95744 297 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 DBIP07108 87 aaKnown RBP11.42□□□□□ -0.58
CHD3-206ENST00000452447 CCNA2P20248 432 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 CRATP43155 626 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 YTHDF3Q7Z739 585 aaKnown RBP11.42□□□□□ -0.58
CHD3-206ENST00000452447 ADGRG3Q86Y34 549 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 PEX5LQ8IYB4 626 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 GOLGA6L1Q8N7Z2 621 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 AKAP1Q92667 903 aaKnown RBP eCLIP11.42□□□□□ -0.58
CHD3-206ENST00000452447 DDIT4LQ96D03 193 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 DNAJA3Q96EY1 480 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 ARL5BQ96KC2 179 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 TMEM204Q9BSN7 226 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 OR11A1Q9GZK7 315 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 CXorf56Q9H5V9 222 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 VIPAS39Q9H9C1 493 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 SDR39U1Q9NRG7 319 aaPredicted RBP11.42□□□□□ -0.58
CHD3-206ENST00000452447 P2RX2Q9UBL9 471 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 RNF115Q9Y4L5 304 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 ALPK2Q86TB3 2170 aa11.42□□□□□ -0.58
CHD3-206ENST00000452447 TMEM247A6NEH6 219 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 CFAP73A6NFT4 308 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 GPR171O14626 319 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 HS3ST1O14792 307 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 KLF11O14901 512 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 DNPH1O43598 174 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 ADAM11O75078 769 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 CD3EP07766 207 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 MAGEA8P43361 318 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 POLR2HP52434 150 aaKnown RBP11.41□□□□□ -0.58
CHD3-206ENST00000452447 POLR2JP52435 117 aaKnown RBP11.41□□□□□ -0.58
CHD3-206ENST00000452447 OR2B6P58173 313 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 PDK3Q15120 406 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 STK11Q15831 433 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 C6orf10Q5SRN2 563 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 MRPL2Q5T653 305 aaKnown RBP11.41□□□□□ -0.58
CHD3-206ENST00000452447 ABLIM2Q6H8Q1 611 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 MSANTD1Q6ZTZ1 278 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.41□□□□□ -0.58
CHD3-206ENST00000452447 MAVSQ7Z434 540 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 UBE2J2Q8N2K1 259 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 MIER2Q8N344 545 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 ZNF611Q8N823 705 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 PIGXQ8TBF5 258 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 ZNF75CPQ92670 426 aaPredicted RBP11.41□□□□□ -0.58
CHD3-206ENST00000452447 MUCL1Q96DR8 90 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 ITCHQ96J02 903 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 Q96MF0 132 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 OR52B2Q96RD2 323 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 GSX2Q9BZM3 304 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 CALML5Q9NZT1 146 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 TMEM181Q9P2C4 612 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 NOSIPQ9Y314 301 aaKnown RBP11.41□□□□□ -0.58
CHD3-206ENST00000452447 ZANQ9Y493 2812 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 HIVEP2P31629 2446 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 IGKV3D-15A0A087WSY6 115 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 TMED7-TICAM2A0A0A6YYA0 188 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 FAM171A2A8MVW0 826 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 AP3D1O14617 1153 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 ZCCHC18P0CG32 403 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 GGT1P19440 569 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 RPS4Y1P22090 263 aaKnown RBP11.41□□□□□ -0.58
CHD3-206ENST00000452447 TACR3P29371 465 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 SLC1A3P43003 542 aa11.41□□□□□ -0.58
CHD3-206ENST00000452447 PTH2RP49190 550 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms