RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 FAAHO00519 579 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 KRT75O95678 551 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 PMS2P2O95744 297 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 ZCCHC18P0CG32 403 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 COX5AP20674 150 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 IL32P24001 234 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 IDH2P48735 452 aaKnown RBP11.05□□□□□ -0.64
CPSF4-208ENST00000452047 ITGADQ13349 1161 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 PDK3Q15120 406 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 TAB1Q15750 504 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 GTDC1Q4AE62 458 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 Q5PR19 223 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 MRPL2Q5T653 305 aaKnown RBP11.05□□□□□ -0.64
CPSF4-208ENST00000452047 MSANTD1Q6ZTZ1 278 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 MTDHQ86UE4 582 aaKnown RBP11.05□□□□□ -0.64
CPSF4-208ENST00000452047 WDR60Q8WVS4 1066 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 PMM1Q92871 262 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 KISS1RQ969F8 398 aaPredicted RBP11.05□□□□□ -0.64
CPSF4-208ENST00000452047 ZNF775Q96BV0 537 aaPredicted RBP11.05□□□□□ -0.64
CPSF4-208ENST00000452047 OR11A1Q9GZK7 315 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 MTHFD2LQ9H903 347 aaPredicted RBP11.05□□□□□ -0.64
CPSF4-208ENST00000452047 HDGFL3Q9Y3E1 203 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 CADP27708 2225 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 HS3ST1O14792 307 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 UBDO15205 165 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 ARHGEF9O43307 516 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 DNPH1O43598 174 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 CNOT4O95628 575 aaKnown RBP11.04□□□□□ -0.64
CPSF4-208ENST00000452047 DBIP07108 87 aaKnown RBP11.04□□□□□ -0.64
CPSF4-208ENST00000452047 NR2F1P10589 423 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 TFPIP10646 304 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 ETFAP13804 333 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 FKBP2P26885 142 aaKnown RBP11.04□□□□□ -0.64
CPSF4-208ENST00000452047 HTR3AP46098 478 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 CLK1P49759 484 aaKnown RBP11.04□□□□□ -0.64
CPSF4-208ENST00000452047 SLC16A1P53985 500 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 H3F3AP84243 136 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 AGBL2Q5U5Z8 902 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 EPGNQ6UW88 154 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 PRSS57Q6UWY2 283 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.04□□□□□ -0.64
CPSF4-208ENST00000452047 GALNT5Q7Z7M9 940 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 ATG4DQ86TL0 474 aaPredicted RBP11.04□□□□□ -0.64
CPSF4-208ENST00000452047 P3H2Q8IVL5 708 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 HSD17B8Q92506 261 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 VPS33AQ96AX1 596 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 DNAJA3Q96EY1 480 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 AURKBQ96GD4 344 aaPredicted RBP11.04□□□□□ -0.64
CPSF4-208ENST00000452047 POM121Q96HA1 1249 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 C18orf12Q96KH6 178 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 C7orf26Q96N11 449 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 USB1Q9BQ65 265 aaKnown RBP11.04□□□□□ -0.64
CPSF4-208ENST00000452047 POTEKPQ9BYX7 375 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 GSX2Q9BZM3 304 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 TPT1P8Q9HAU6 139 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 P2RX2Q9UBL9 471 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 OSGIN1Q9UJX0 560 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 USH1CQ9Y6N9 552 aa11.04□□□□□ -0.64
CPSF4-208ENST00000452047 USF3Q68DE3 2245 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 TMED7-TICAM2A0A0A6YYA0 188 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 CDHR4A6H8M9 788 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 CFAP73A6NFT4 308 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 ZNF208O43345 1280 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 RAMP1O60894 148 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 LYZL6O75951 148 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 TFPTP0C1Z6 253 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 PAX1P15863 534 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 IL7RP16871 459 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 HOXB9P17482 250 aaPredicted RBP11.03□□□□□ -0.64
CPSF4-208ENST00000452047 IGHV1-2P23083 117 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 TACR3P29371 465 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 NTF4P34130 210 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 SLC1A3P43003 542 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 MRPL19P49406 292 aaKnown RBP11.03□□□□□ -0.64
CPSF4-208ENST00000452047 POLR2HP52434 150 aaKnown RBP11.03□□□□□ -0.64
CPSF4-208ENST00000452047 POLR2JP52435 117 aaKnown RBP11.03□□□□□ -0.64
CPSF4-208ENST00000452047 EPS8Q12929 822 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 GNA13Q14344 377 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 NCMAPQ5T1S8 102 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 ALKBH2Q6NS38 261 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 ADAM5Q6NVV9 412 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 BHLHA15Q7RTS1 189 aaPredicted RBP11.03□□□□□ -0.64
CPSF4-208ENST00000452047 BIVMQ86UB2 503 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 PEX5LQ8IYB4 626 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 MIER2Q8N344 545 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 ZNF611Q8N823 705 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 LILRB1Q8NHL6 650 aaPredicted RBP11.03□□□□□ -0.64
CPSF4-208ENST00000452047 PIGXQ8TBF5 258 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 SLC38A5Q8WUX1 472 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 GTF2H4Q92759 462 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 ZHX1-C8orf76Q96EF9 292 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 PERPQ96FX8 193 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 ITCHQ96J02 903 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 SMR3AQ99954 134 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 RMND5AQ9H871 391 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 RLIMQ9NVW2 624 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 EMC3Q9P0I2 261 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 TMEM181Q9P2C4 612 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 TRAPPC4Q9Y296 219 aa11.03□□□□□ -0.64
CPSF4-208ENST00000452047 TMED7Q9Y3B3 224 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms