RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 SPAG4Q9NPE6 437 aa12.59□□□□□ -0.39
GTF3C3-206ENST00000448539 ARL8BQ9NVJ2 186 aa12.59□□□□□ -0.39
GTF3C3-206ENST00000448539 NDE1Q9NXR1 346 aa12.59□□□□□ -0.39
GTF3C3-206ENST00000448539 ADA2Q9NZK5 511 aa12.59□□□□□ -0.39
GTF3C3-206ENST00000448539 SELENONQ9NZV5 590 aa12.59□□□□□ -0.39
GTF3C3-206ENST00000448539 ZNF629Q9UEG4 869 aaPredicted RBP12.59□□□□□ -0.39
GTF3C3-206ENST00000448539 OSGIN1Q9UJX0 560 aa12.59□□□□□ -0.39
GTF3C3-206ENST00000448539 CHST2Q9Y4C5 530 aa12.59□□□□□ -0.39
GTF3C3-206ENST00000448539 KLF2Q9Y5W3 355 aaPredicted RBP12.59□□□□□ -0.39
GTF3C3-206ENST00000448539 A0A1W2PNR3 127 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 SYT5O00445 386 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 PLGP00747 810 aaPredicted RBP12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 C8BP07358 591 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 PRG2P13727 222 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 BMP5P22003 454 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 CSNK2A1P68400 391 aaPredicted RBP12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 HOXC5Q00444 222 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 KRT72Q14CN4 511 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 GLIPR1L2Q4G1C9 344 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 LRRC23Q53EV4 343 aaPredicted RBP12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 C8orf82Q6P1X6 216 aaPredicted RBP12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 RANBP3LQ86VV4 465 aaPredicted RBP12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 ADGRG3Q86Y34 549 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 MCEMP1Q8IX19 187 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 GCNT2Q8N0V5 402 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 FITM2Q8N6M3 262 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 NAXEQ8NCW5 288 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 OR52E4Q8NGH9 312 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 PHF3Q92576 2039 aaKnown RBP12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 PROX1Q92786 737 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 TAMM41Q96BW9 452 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 LRRC46Q96FV0 321 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 KCTD14Q9BQ13 255 aaPredicted RBP12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 ZNF559Q9BR84 538 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 SFXN3Q9BWM7 321 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 UCK2Q9BZX2 261 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 TRIM2Q9C040 744 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 ADAM19Q9H013 955 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 ALG2Q9H553 416 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 TMEM27Q9HBJ8 222 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 CHST11Q9NPF2 352 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 TESQ9UGI8 421 aaKnown RBP12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 USP22Q9UPT9 525 aa12.58□□□□□ -0.4
GTF3C3-206ENST00000448539 SULT2B1O00204 365 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 ZNF208O43345 1280 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 GCM2O75603 506 aaPredicted RBP12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 LGI1O95970 557 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 IL18BPO95998 194 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 CRHP06850 196 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 KCNJ5P48544 419 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 CLK1P49759 484 aaKnown RBP12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 AGFG1P52594 562 aaKnown RBP12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 ZNF136P52737 540 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 RAC3P60763 192 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 CDSNQ15517 529 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 DUSP7Q16829 419 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 C16orf89Q6UX73 402 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 TMPPEQ6ZT21 453 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 CNEP1R1Q8N9A8 125 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 RNF217Q8TC41 542 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 ZHX1-C8orf76Q96EF9 292 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 NSL1Q96IY1 281 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 COQ10BQ9H8M1 238 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 BAG5Q9UL15 447 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 SLC9A8Q9Y2E8 581 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 HDGFL3Q9Y3E1 203 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 HEATR5AQ86XA9 2040 aa12.57□□□□□ -0.4
GTF3C3-206ENST00000448539 TMEM72A0PK05 275 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 NKX2-6A6NCS4 301 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 ELOA3DA6NLF2 546 aaPredicted RBP12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 EEF1E1-BLOC1S5C9J1V9 151 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 M0R3H8 397 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 NME4O00746 187 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 EEF1E1O43324 174 aaKnown RBP12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 GMNNO75496 209 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 AQP8O94778 261 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 FESP07332 822 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 ENPP1P22413 925 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 KDELR2P33947 212 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 GSK3BP49841 420 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 CTBP2P56545 445 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 ZNF239Q16600 458 aaKnown RBP12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 ELOA3BQ3SY89 546 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 LIX1LQ8IVB5 337 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 PGAM4Q8N0Y7 254 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 LSMEM1Q8N8F7 131 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 ELOA3Q8NG57 546 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 GPR32P1Q8NGA4 272 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 VANGL1Q8TAA9 524 aaPredicted RBP12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 DNAJA4Q8WW22 397 aaPredicted RBP12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 ROBO4Q8WZ75 1007 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 LZICQ8WZA0 190 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 C3orf49Q96BT1 292 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 ARHGDIGQ99819 225 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 SRXN1Q9BYN0 137 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 OR11A1Q9GZK7 315 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 PIGMQ9H3S5 423 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 RNF122Q9H9V4 155 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 GLRX2Q9NS18 164 aa12.56□□□□□ -0.4
GTF3C3-206ENST00000448539 ADPRHL2Q9NX46 363 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms