RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 GPR52Q9Y2T5 361 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 MTMR11A4FU01 709 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 OR6C68A6NDL8 312 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 RNF13O43567 381 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 SLC35G6P0C7Q6 338 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 ELFN1P0C7U0 828 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 CCR6P51684 374 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 ACSM3Q53FZ2 586 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 TMEM31Q5JXX7 168 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 LIPJQ5W064 366 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 PET117Q6UWS5 81 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 TMEM173Q86WV6 379 aaPredicted RBP8.64□□□□□ -1.03
SMC6-207ENST00000448223 PGBD5Q8N414 524 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 OR8U1Q8NH10 309 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 RAB8BQ92930 207 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 MRPL38Q96DV4 380 aaKnown RBP8.64□□□□□ -1.03
SMC6-207ENST00000448223 SDSLQ96GA7 329 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 PRRG4Q9BZD6 226 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 TMEM231Q9H6L2 316 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 OSGIN2Q9Y236 505 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 CEP290O15078 2479 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 MAP1BP46821 2468 aaKnown RBP8.64□□□□□ -1.03
SMC6-207ENST00000448223 DCTN6O00399 190 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 CLDN7O95471 211 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 RAB40ALP0C0E4 278 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 ELK1P19419 428 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 PREPP48147 710 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 RPL24P83731 157 aaKnown RBP8.64□□□□□ -1.03
SMC6-207ENST00000448223 SLBPQ14493 270 aaKnown RBP eCLIP8.64□□□□□ -1.03
SMC6-207ENST00000448223 HABP2Q14520 560 aaPredicted RBP8.64□□□□□ -1.03
SMC6-207ENST00000448223 TAF9Q16594 264 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 SMN1Q16637 294 aaKnown RBP8.64□□□□□ -1.03
SMC6-207ENST00000448223 FNDC3BQ53EP0 1204 aaKnown RBP8.64□□□□□ -1.03
SMC6-207ENST00000448223 ATPAF1Q5TC12 328 aaPredicted RBP8.64□□□□□ -1.03
SMC6-207ENST00000448223 SLC46A3Q7Z3Q1 461 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 TPRA1Q86W33 373 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 BPIFB2Q8N4F0 458 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 RAB40AQ8WXH6 277 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 ZNF681Q96N22 645 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 ZNF382Q96SR6 550 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 OR6C76A6NM76 312 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 TCF21O43680 179 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 DPM1O60762 260 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 PDGFBP01127 241 aaPredicted RBP8.64□□□□□ -1.03
SMC6-207ENST00000448223 CSF2RBP32927 897 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 MOGAT2Q3SYC2 334 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 KIAA1324Q6UXG2 1013 aaKnown RBP8.64□□□□□ -1.03
SMC6-207ENST00000448223 MCATQ8IVS2 390 aaKnown RBP8.64□□□□□ -1.03
SMC6-207ENST00000448223 ZNF610Q8N9Z0 462 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 OR4M1Q8NGD0 313 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 OR51A7Q8NH64 312 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 SCMH1Q96GD3 660 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 ZNF587Q96SQ5 575 aaPredicted RBP8.64□□□□□ -1.03
SMC6-207ENST00000448223 ZNF559Q9BR84 538 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 TRAF4Q9BUZ4 470 aaPredicted RBP8.64□□□□□ -1.03
SMC6-207ENST00000448223 PCBD2Q9H0N5 130 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 C11orf49Q9H6J7 331 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 TLR9Q9NR96 1032 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 CHRNA9Q9UGM1 479 aa8.64□□□□□ -1.03
SMC6-207ENST00000448223 KDELR3O43731 214 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 SRPX2O60687 465 aaPredicted RBP8.63□□□□□ -1.03
SMC6-207ENST00000448223 TTRP02766 147 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 TNFRSF1BP20333 461 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 PTNP21246 168 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 PTBP1P26599 531 aaKnown RBP eCLIP8.63□□□□□ -1.031e-9■■■■□ 23.2
SMC6-207ENST00000448223 GRB2P62993 217 aaKnown RBP8.63□□□□□ -1.03
SMC6-207ENST00000448223 RAB40BQ12829 278 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 CDONQ4KMG0 1287 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 NDUFAF7Q7L592 441 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 ADGRG3Q86Y34 549 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 COMMD1Q8N668 190 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 OR5AK2Q8NH90 309 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 BBS10Q8TAM1 723 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 APH1BQ8WW43 257 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 NUDT16L1Q9BRJ7 211 aaKnown RBP8.63□□□□□ -1.03
SMC6-207ENST00000448223 GPR62Q9BZJ7 368 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 ARL2-SNX15V9GYD0 113 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 WDR81Q562E7 1941 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 TARM1B6A8C7 271 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 GPR137BO60478 399 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 ADH1BP00325 375 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 RPLP1P05386 114 aaKnown RBP8.63□□□□□ -1.03
SMC6-207ENST00000448223 QDPRP09417 244 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 IL12BP29460 328 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 CLDN6P56747 220 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 ZNF74Q16587 644 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 MAMDC4Q6UXC1 1216 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 SIAH3Q8IW03 269 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 LINC00469Q8N7U9 141 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 OR4K1Q8NGD4 311 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 OR13C3Q8NGS6 347 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 OR13C9Q8NGT0 318 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 MYEOVQ96EZ4 313 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 POLDIP3Q9BY77 421 aaKnown RBP8.63□□□□□ -1.03
SMC6-207ENST00000448223 OR2AG1Q9H205 316 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 SDR39U1Q9NRG7 319 aaPredicted RBP8.63□□□□□ -1.03
SMC6-207ENST00000448223 BET1LQ9NYM9 111 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 ANKRD66B4E2M5 251 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 BRINP1O60477 761 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 UBL3O95164 117 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms