RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 NDUFAF6Q330K2 333 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 RNF212Q495C1 297 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 ALKAL2Q6UX46 152 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 USP53Q70EK8 1073 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 HIST3H2AQ7L7L0 130 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 GID4Q8IVV7 300 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 ARMC10Q8N2F6 343 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 C2orf73Q8N5S3 287 aaPredicted RBP5.08□□□□□ -1.6
LMO3-209ENST00000447609 ZNF671Q8TAW3 534 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 GNPDA2Q8TDQ7 276 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 CNOT9Q92600 299 aaKnown RBP5.08□□□□□ -1.6
LMO3-209ENST00000447609 HIST1H2ACQ93077 130 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 MAL2Q969L2 176 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 PKP4Q99569 1192 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 ELF4Q99607 663 aaPredicted RBP5.08□□□□□ -1.6
LMO3-209ENST00000447609 SEC22CQ9BRL7 303 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 ZDHHC5Q9C0B5 715 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 SLC38A1Q9H2H9 487 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 EVA1AQ9H8M9 152 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 CACYBPQ9HB71 228 aaKnown RBP5.08□□□□□ -1.6
LMO3-209ENST00000447609 COA4Q9NYJ1 87 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 ZNF69Q9UC07 566 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 FBXL2Q9UKC9 423 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 PLEKHA6Q9Y2H5 1048 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 DYRK1BQ9Y463 629 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 DNMT3AQ9Y6K1 912 aaPredicted RBP5.08□□□□□ -1.6
LMO3-209ENST00000447609 TRPM6Q9BX84 2022 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 TECTAO75443 2155 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 SCN8AQ9UQD0 1980 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 RAB19A4D1S5 217 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 PATE3B3GLJ2 98 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 IMPA2O14732 288 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 PCDH7O60245 1069 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 C1SP09871 688 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 NUDT7P0C024 238 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 H2AFB1P0C5Y9 115 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 ELAVL4P26378 380 aaKnown RBP5.08□□□□□ -1.6
LMO3-209ENST00000447609 TIA1P31483 386 aaKnown RBP eCLIP5.08□□□□□ -1.6
LMO3-209ENST00000447609 LSM11P83369 360 aaKnown RBP eCLIP5.08□□□□□ -1.6
LMO3-209ENST00000447609 Q3ZCU0 254 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 CDNFQ49AH0 187 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 FAM76BQ5HYJ3 339 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 HENMT1Q5T8I9 393 aaKnown RBP5.08□□□□□ -1.6
LMO3-209ENST00000447609 OR2G6Q5TZ20 316 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 PMS2CLQ68D20 193 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 TCEAL6Q6IPX3 200 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 ZNF770Q6IQ21 691 aaPredicted RBP5.08□□□□□ -1.6
LMO3-209ENST00000447609 SFXN4Q6P4A7 337 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 C11orf88Q6PI97 169 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 TMIGD1Q6UXZ0 262 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 FAM122BQ7Z309 247 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 KRT77Q7Z794 578 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 ZNF527Q8NB42 609 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 AVL9Q8NBF6 648 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 OR2I1PQ8NGU4 316 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 SLC5A11Q8WWX8 675 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 OSTF1Q92882 214 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 ORAI1Q96D31 301 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 CXorf58Q96LI9 332 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 ZFP3Q96NJ6 502 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 MNTQ99583 582 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 DUSP23Q9BVJ7 150 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 SLC6A20Q9NP91 592 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 FSCN3Q9NQT6 498 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 MBNL1Q9NR56 388 aaKnown RBP5.08□□□□□ -1.6
LMO3-209ENST00000447609 TMEM184CQ9NVA4 438 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 SPHK1Q9NYA1 384 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 REV1Q9UBZ9 1251 aa5.08□□□□□ -1.6
LMO3-209ENST00000447609 FXYD6-FXYD2A0A087WZ82 144 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 TRABD2BA6NFA1 517 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 ANKRD61A6NGH8 418 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 CD8B2A6NJW9 211 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 F5H5P2 479 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 GTPBP1O00178 669 aaKnown RBP5.07□□□□□ -1.6
LMO3-209ENST00000447609 ARPC5O15511 151 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 SELENOFO60613 162 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 CDC123O75794 336 aaPredicted RBP5.07□□□□□ -1.6
LMO3-209ENST00000447609 RLN2P04090 185 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 CD8BP10966 210 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 CR2P20023 1033 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 TNFRSF1BP20333 461 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 UQCRC2P22695 453 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 NDUFS1P28331 727 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 GRK6P43250 576 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 ZNF763Q0D2J5 394 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 SF1Q15637 639 aaKnown RBP5.07□□□□□ -1.6
LMO3-209ENST00000447609 MPPED2Q15777 294 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 CDKN3Q16667 212 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 HLA-BQ31612 363 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 SLC25A25Q6KCM7 469 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 PGBD2Q6P3X8 592 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 PAQR6Q6TCH4 344 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 WDR53Q7Z5U6 358 aaPredicted RBP5.07□□□□□ -1.6
LMO3-209ENST00000447609 FAM129CQ86XR2 697 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 OR10K1Q8NGX5 313 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 SFT2D1Q8WV19 159 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 TFGQ92734 400 aaPredicted RBP5.07□□□□□ -1.6
LMO3-209ENST00000447609 PHYHIPLQ96FC7 376 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 C1QTNF2Q9BXJ5 285 aa5.07□□□□□ -1.6
LMO3-209ENST00000447609 SLC12A9Q9BXP2 914 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms