RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 FREM1Q5H8C1 2179 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 UNC79Q9P2D8 2635 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 PRORSD1PA6NEY8 169 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 M0QX08 132 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 M0R3H8 397 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 FAAHO00519 579 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 NME4O00746 187 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 SHOX2O60902 331 aaPredicted RBP10.67□□□□□ -0.7
RFC4-208ENST00000447345 GCM2O75603 506 aaPredicted RBP10.67□□□□□ -0.7
RFC4-208ENST00000447345 DCTN3O75935 186 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 SMNDC1O75940 238 aaKnown RBP eCLIP10.67□□□□□ -0.7
RFC4-208ENST00000447345 MFN2O95140 757 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 FAM107AO95990 144 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 KLK2P20151 261 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 HTR2AP28223 471 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 UQCRC1P31930 480 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 OPRM1P35372 400 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 CPOXP36551 454 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 SLC1A3P43003 542 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 HTR3AP46098 478 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 ASCL1P50553 236 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 DLX5P56178 289 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 TFF3Q07654 80 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 BNIP2Q12982 314 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 SNTB1Q13884 538 aaKnown RBP10.67□□□□□ -0.7
RFC4-208ENST00000447345 ZSWIM7Q19AV6 140 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 LRRC23Q53EV4 343 aaPredicted RBP10.67□□□□□ -0.7
RFC4-208ENST00000447345 INTS11Q5TA45 600 aaKnown RBP10.67□□□□□ -0.7
RFC4-208ENST00000447345 GKAP1Q5VSY0 366 aaPredicted RBP10.67□□□□□ -0.7
RFC4-208ENST00000447345 WBP2NLQ6ICG8 309 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 VWA1Q6PCB0 445 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 ARPINQ7Z6K5 226 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 PATL1Q86TB9 770 aaKnown RBP10.67□□□□□ -0.7
RFC4-208ENST00000447345 ADGRG3Q86Y34 549 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 SLC30A8Q8IWU4 369 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 OR2T12Q8NG77 320 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 RNF217Q8TC41 542 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 ABHD3Q8WU67 409 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 SLC25A43Q8WUT9 341 aaPredicted RBP10.67□□□□□ -0.7
RFC4-208ENST00000447345 CPNE4Q96A23 557 aaPredicted RBP10.67□□□□□ -0.7
RFC4-208ENST00000447345 TAMM41Q96BW9 452 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 ARL5BQ96KC2 179 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 ZNF583Q96ND8 569 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 WFDC6Q9BQY6 131 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 GPATCH1Q9BRR8 931 aaKnown RBP10.67□□□□□ -0.7
RFC4-208ENST00000447345 SFXN3Q9BWM7 321 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 CHST11Q9NPF2 352 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 TIGARQ9NQ88 270 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 PAQR5Q9NXK6 330 aaPredicted RBP10.67□□□□□ -0.7
RFC4-208ENST00000447345 KLHL28Q9NXS3 571 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 RPS6KB2Q9UBS0 482 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 ZNF629Q9UEG4 869 aaPredicted RBP10.67□□□□□ -0.7
RFC4-208ENST00000447345 ADAM21Q9UKJ8 722 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 CELSR2Q9HCU4 2923 aa10.67□□□□□ -0.7
RFC4-208ENST00000447345 ADGRG4Q8IZF6 3080 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 CACNA1DQ01668 2161 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 ZC3H12DA2A288 527 aaKnown RBP10.66□□□□□ -0.7
RFC4-208ENST00000447345 SULT2B1O00204 365 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 TNFSF13O75888 250 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 FESP07332 822 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 COX6B1P14854 86 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 PTNP21246 168 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 ENPP1P22413 925 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 CXCR1P25024 350 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 PRDX6P30041 224 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 DIO1P49895 249 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 LIPEQ05469 1076 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 MYBPHQ13203 477 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 DUSP7Q16829 419 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 ERICH5Q6P6B1 374 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 MEX3BQ6ZN04 569 aaKnown RBP10.66□□□□□ -0.7
RFC4-208ENST00000447345 FCRLAQ7L513 359 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 MCEMP1Q8IX19 187 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 SLC15A3Q8IY34 581 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 MICU2Q8IYU8 434 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 CCDC197Q8NCU1 140 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 GPR32P1Q8NGA4 272 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 OR52E4Q8NGH9 312 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 RNF128Q8TEB7 428 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 C3orf49Q96BT1 292 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 ARL8BQ9NVJ2 186 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 PACSIN3Q9UKS6 424 aa10.66□□□□□ -0.7
RFC4-208ENST00000447345 NBPF19A0A087WUL8 3843 aa10.65□□□□□ -0.7
RFC4-208ENST00000447345 ELOVL7A1L3X0 281 aa10.65□□□□□ -0.7
RFC4-208ENST00000447345 SMAD9O15198 467 aaKnown RBP10.65□□□□□ -0.7
RFC4-208ENST00000447345 IL18BPO95998 194 aa10.65□□□□□ -0.7
RFC4-208ENST00000447345 TNFRSF1BP20333 461 aa10.65□□□□□ -0.7
RFC4-208ENST00000447345 CD247P20963 164 aa10.65□□□□□ -0.7
RFC4-208ENST00000447345 CRYBA2P53672 197 aa10.65□□□□□ -0.7
RFC4-208ENST00000447345 CTBP2P56545 445 aa10.65□□□□□ -0.7
RFC4-208ENST00000447345 OR2B6P58173 313 aa10.65□□□□□ -0.7
RFC4-208ENST00000447345 PSME3P61289 254 aa10.65□□□□□ -0.7
RFC4-208ENST00000447345 MXRA7P84157 204 aa10.65□□□□□ -0.7
RFC4-208ENST00000447345 C8orf82Q6P1X6 216 aaPredicted RBP10.65□□□□□ -0.7
RFC4-208ENST00000447345 HACD2Q6Y1H2 254 aa10.65□□□□□ -0.7
RFC4-208ENST00000447345 BTLAQ7Z6A9 289 aa10.65□□□□□ -0.7
RFC4-208ENST00000447345 RANBP3LQ86VV4 465 aaPredicted RBP10.65□□□□□ -0.7
RFC4-208ENST00000447345 BHLHE22Q8NFJ8 381 aaPredicted RBP10.65□□□□□ -0.7
RFC4-208ENST00000447345 MARVELD3Q96A59 401 aa10.65□□□□□ -0.7
RFC4-208ENST00000447345 DDIT4LQ96D03 193 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms