RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 MT-ND4P03905 459 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 GYPBP06028 91 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 SYPP08247 313 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 OR2T7P0C7T2 308 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 NPIPA8P0DM63 369 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 DRD5P21918 477 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 HOXD11P31277 338 aaPredicted RBP17.6■□□□□ 0.41
SDCBP-204ENST00000447182 GBX2P52951 348 aaPredicted RBP17.6■□□□□ 0.41
SDCBP-204ENST00000447182 EPHA4P54764 986 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 SRP54P61011 504 aaKnown RBP17.6■□□□□ 0.41
SDCBP-204ENST00000447182 GGTLC2Q14390 218 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 TP53I3Q53FA7 332 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 C2orf27AQ580R0 203 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 RNASE12Q5GAN4 147 aaKnown RBP17.6■□□□□ 0.41
SDCBP-204ENST00000447182 FAM69AQ5T7M9 428 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 VITQ6UXI7 678 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 SLITRK4Q8IW52 837 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 RFLNBQ8N5W9 214 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 POMGNT2Q8NAT1 580 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 OR2T27Q8NH04 317 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 OR2A5Q96R48 311 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 TNFRSF13CQ96RJ3 184 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 CLEC4MQ9H2X3 399 aaPredicted RBP17.6■□□□□ 0.41
SDCBP-204ENST00000447182 PLEKHA1Q9HB21 404 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 MCCC2Q9HCC0 563 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 IL23AQ9NPF7 189 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 NRIP3Q9NQ35 241 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 POLE3Q9NRF9 147 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 DPP7Q9UHL4 492 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 RPS10-NUDT3A0A1W2PQS6 291 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 URADA6NGE7 173 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 PEX14O75381 377 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 TFP02787 698 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 IGFALSP35858 605 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 GDNFP39905 211 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 RBM34P42696 430 aaKnown RBP17.59■□□□□ 0.41
SDCBP-204ENST00000447182 SIRPAP78324 504 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 CDONQ4KMG0 1287 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 UNQ9370/PRO34162Q6UXP9 181 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 SYT9Q86SS6 491 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 PIAS4Q8N2W9 510 aaPredicted RBP17.59■□□□□ 0.41
SDCBP-204ENST00000447182 ZNF527Q8NB42 609 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 PHYHIPQ92561 330 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 C20orf85Q9H1P6 137 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 NARFLQ9H6Q4 476 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 P2RX6O15547 441 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 SSNA1O43805 119 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 DNAJB6O75190 326 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 KAT7O95251 611 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 TGM6O95932 706 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 IFI6P09912 130 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 ZP1P60852 638 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 ENPP2Q13822 863 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 FGFBP1Q14512 234 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 RPL22L1Q6P5R6 122 aaKnown RBP17.59■□□□□ 0.41
SDCBP-204ENST00000447182 ESPNLQ6ZVH7 1005 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 ZCCHC10Q8TBK6 192 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 SLC22A18Q96BI1 424 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 APOOQ9BUR5 198 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 LYRM4Q9HD34 91 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 FLRT3Q9NZU0 649 aa17.59■□□□□ 0.41
SDCBP-204ENST00000447182 AKAP7Q9P0M2 348 aaPredicted RBP17.59■□□□□ 0.41
SDCBP-204ENST00000447182 USP36Q9P275 1121 aaKnown RBP17.59■□□□□ 0.41
SDCBP-204ENST00000447182 MKI67P46013 3256 aaKnown RBP17.58■□□□□ 0.41
SDCBP-204ENST00000447182 A0A1W2PPK0 400 aa17.58■□□□□ 0.4
SDCBP-204ENST00000447182 KHNYNO15037 678 aaKnown RBP17.58■□□□□ 0.4
SDCBP-204ENST00000447182 PRAF2O60831 178 aa17.58■□□□□ 0.4
SDCBP-204ENST00000447182 MPC2O95563 127 aa17.58■□□□□ 0.4
SDCBP-204ENST00000447182 ZNF10P21506 573 aaPredicted RBP17.58■□□□□ 0.4
SDCBP-204ENST00000447182 ZNF81P51508 661 aa17.58■□□□□ 0.4
SDCBP-204ENST00000447182 EXOSC2Q13868 293 aaKnown RBP17.58■□□□□ 0.4
SDCBP-204ENST00000447182 GRK1Q15835 563 aa17.58■□□□□ 0.4
SDCBP-204ENST00000447182 BEST4Q8NFU0 473 aa17.58■□□□□ 0.4
SDCBP-204ENST00000447182 FLVCR1-AS1Q8TAF5 88 aa17.58■□□□□ 0.4
SDCBP-204ENST00000447182 LGALS14Q8TCE9 139 aa17.58■□□□□ 0.4
SDCBP-204ENST00000447182 CNN2Q99439 309 aaKnown RBP17.58■□□□□ 0.4
SDCBP-204ENST00000447182 DPCDQ9BVM2 203 aaPredicted RBP17.58■□□□□ 0.4
SDCBP-204ENST00000447182 SLC17A9Q9BYT1 436 aa17.58■□□□□ 0.4
SDCBP-204ENST00000447182 ZNF436Q9C0F3 470 aaPredicted RBP17.58■□□□□ 0.4
SDCBP-204ENST00000447182 CHRNA9Q9UGM1 479 aa17.58■□□□□ 0.4
SDCBP-204ENST00000447182 G3V3Q6 166 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 TNFSF14O43557 240 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 TMEM127O75204 238 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 WASP42768 502 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 POU6F2P78424 691 aaPredicted RBP17.57■□□□□ 0.4
SDCBP-204ENST00000447182 FIGNL1Q6PIW4 674 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 PRSS45Q7RTY3 260 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 HDDC2Q7Z4H3 204 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 UBE2Q1Q7Z7E8 422 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 SLC38A6Q8IZM9 456 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 CMTM4Q8IZR5 234 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 OR6C4Q8NGE1 309 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 ZNF671Q8TAW3 534 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 GRHL3Q8TE85 626 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 MYADMQ96S97 322 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 AUNIPQ9H7T9 357 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 NANSQ9NR45 359 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 TMEM74BQ9NUR3 256 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 UBQLN2Q9UHD9 624 aa17.57■□□□□ 0.4
SDCBP-204ENST00000447182 AK6Q9Y3D8 172 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms