RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 TMEM176BQ3YBM2 270 aaPredicted RBP15.72■□□□□ 0.11
SGCE-206ENST00000445866 TTC33Q6PID6 262 aaPredicted RBP15.72■□□□□ 0.11
SGCE-206ENST00000445866 LINC00114Q6XXX2 140 aa15.72■□□□□ 0.11
SGCE-206ENST00000445866 TRILQ7L0X0 811 aa15.72■□□□□ 0.11
SGCE-206ENST00000445866 RRM2BQ7LG56 351 aa15.72■□□□□ 0.11
SGCE-206ENST00000445866 LSRQ86X29 649 aaPredicted RBP15.72■□□□□ 0.11
SGCE-206ENST00000445866 SMPDL3BQ92485 455 aa15.72■□□□□ 0.11
SGCE-206ENST00000445866 ABTB1Q969K4 478 aaPredicted RBP15.72■□□□□ 0.11
SGCE-206ENST00000445866 DHRS1Q96LJ7 313 aa15.72■□□□□ 0.11
SGCE-206ENST00000445866 HS6ST2Q96MM7 605 aa15.72■□□□□ 0.11
SGCE-206ENST00000445866 ALPK1Q96QP1 1244 aa15.72■□□□□ 0.11
SGCE-206ENST00000445866 PKP2Q99959 881 aa15.72■□□□□ 0.11
SGCE-206ENST00000445866 PRSS27Q9BQR3 290 aa15.72■□□□□ 0.11
SGCE-206ENST00000445866 BDH2Q9BUT1 245 aa15.72■□□□□ 0.11
SGCE-206ENST00000445866 AGPAT4Q9NRZ5 378 aa15.72■□□□□ 0.11
SGCE-206ENST00000445866 MAN2C1Q9NTJ4 1040 aa15.72■□□□□ 0.11
SGCE-206ENST00000445866 LIPGQ9Y5X9 500 aa15.72■□□□□ 0.11
SGCE-206ENST00000445866 SPIN1Q9Y657 262 aaPredicted RBP15.72■□□□□ 0.11
SGCE-206ENST00000445866 CACNA1BQ00975 2339 aa15.72■□□□□ 0.11
SGCE-206ENST00000445866 NBEAQ8NFP9 2946 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 TRBV4-1A0A0J9YWV2 114 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 TMEM72A0PK05 275 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 E2F6O75461 281 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 IGHG3P01860 377 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 BMP7P18075 431 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 POU3F2P20265 443 aaPredicted RBP15.71■□□□□ 0.11
SGCE-206ENST00000445866 PTNP21246 168 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 FKBP2P26885 142 aaKnown RBP15.71■□□□□ 0.11
SGCE-206ENST00000445866 MAP2K6P52564 334 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 KRTCAP3Q53RY4 240 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 DCST1Q5T197 706 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 PODNL1Q6PEZ8 512 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 TBPL2Q6SJ96 375 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 ZNF730Q6ZMV8 503 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 WDR88Q6ZMY6 472 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 LSM14AQ8ND56 463 aaKnown RBP15.71■□□□□ 0.11
SGCE-206ENST00000445866 SLC7A13Q8TCU3 470 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 TMEM255BQ8WV15 326 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 TMEM239Q8WW34 195 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 SEMA6AQ9H2E6 1030 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 ANKRD19PQ9H560 264 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 ASF1BQ9NVP2 202 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 VNN3Q9NY84 501 aa15.71■□□□□ 0.11
SGCE-206ENST00000445866 A8MVM7 634 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 ELK4P28324 431 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 SFTPDP35247 375 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 IST1P53990 364 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 RCN1Q15293 331 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 EXOC3L2Q2M3D2 409 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 PRR30Q53SZ7 412 aaPredicted RBP15.7■□□□□ 0.1
SGCE-206ENST00000445866 ZNF324BQ6AW86 544 aaPredicted RBP15.7■□□□□ 0.1
SGCE-206ENST00000445866 DDIT4LQ96D03 193 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 CENPNQ96H22 339 aaPredicted RBP15.7■□□□□ 0.1
SGCE-206ENST00000445866 OR11A1Q9GZK7 315 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 DCLRE1BQ9H816 532 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 NTN4Q9HB63 628 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 TNFRSF10DQ9UBN6 386 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 LYVE1Q9Y5Y7 322 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 AP4B1Q9Y6B7 739 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 A0A087WUU8 490 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 ZNF208O43345 1280 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 ACTL6AO96019 429 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 DNAJA1P31689 397 aaKnown RBP15.7■□□□□ 0.1
SGCE-206ENST00000445866 RBM34P42696 430 aaKnown RBP15.7■□□□□ 0.1
SGCE-206ENST00000445866 MLLT10P55197 1068 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 SELENBP1Q13228 472 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 VASNQ6EMK4 673 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 HMBOX1Q6NT76 420 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 C3orf33Q6P1S2 294 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 ACOT11Q8WXI4 607 aaPredicted RBP15.7■□□□□ 0.1
SGCE-206ENST00000445866 GPR137Q96N19 417 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 TIMP4Q99727 224 aa15.7■□□□□ 0.1
SGCE-206ENST00000445866 A0A1B0GTH9 108 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 A0A1B0GVC2 190 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 ZC3H12DA2A288 527 aaKnown RBP15.69■□□□□ 0.1
SGCE-206ENST00000445866 KPNA4O00629 521 aaPredicted RBP15.69■□□□□ 0.1
SGCE-206ENST00000445866 ANPEPP15144 967 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 ARHGDIAP52565 204 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 LSM11P83369 360 aaKnown RBP eCLIP15.69■□□□□ 0.1
SGCE-206ENST00000445866 HSF1Q00613 529 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 SRYQ05066 204 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 LAPTM4AQ15012 233 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 SEC23BQ15437 767 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 SYT14P1Q58G82 188 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 C1QL3Q5VWW1 255 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 UBQLNLQ8IYU4 475 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 RNF113BQ8IZP6 322 aaKnown RBP15.69■□□□□ 0.1
SGCE-206ENST00000445866 PQLC1Q8N2U9 271 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 STK35Q8TDR2 534 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 SLC25A43Q8WUT9 341 aaPredicted RBP15.69■□□□□ 0.1
SGCE-206ENST00000445866 DNAJA3Q96EY1 480 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 OR5B2Q96R09 309 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 EPYCQ99645 322 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 TMEM43Q9BTV4 400 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 MED31Q9Y3C7 131 aa15.69■□□□□ 0.1
SGCE-206ENST00000445866 IGKV1D-42A0A075B6H8 117 aa15.68■□□□□ 0.1
SGCE-206ENST00000445866 SH3PXD2BA1X283 911 aa15.68■□□□□ 0.1
SGCE-206ENST00000445866 GJE1A6NN92 205 aa15.68■□□□□ 0.1
SGCE-206ENST00000445866 ZNHIT1O43257 154 aa15.68■□□□□ 0.1
SGCE-206ENST00000445866 LIMS1P48059 325 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms