RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 ZNF385DQ9H6B1 395 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 A4GALTQ9NPC4 353 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 CCM2LQ9NUG4 571 aaPredicted RBP13.13□□□□□ -0.31
USE1-202ENST00000445667 TMEM45AQ9NWC5 275 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 KLHL9Q9P2J3 617 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 ST6GALNAC2Q9UJ37 374 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 ZNF232Q9UNY5 417 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 PLEKHA6Q9Y2H5 1048 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 CHST2Q9Y4C5 530 aa13.13□□□□□ -0.31
USE1-202ENST00000445667 SPIN1Q9Y657 262 aaPredicted RBP13.13□□□□□ -0.31
USE1-202ENST00000445667 ANKHD1Q8IWZ3 2542 aaKnown RBP13.13□□□□□ -0.31
USE1-202ENST00000445667 TRBV5-3A0A0A0MS03 114 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 A0A1W2PP18 115 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 C5orf58C9J3I9 102 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 FAAHO00519 579 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 CYTIPO60759 359 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 PGM3O95394 542 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 HTR3AP46098 478 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 POLR2HP52434 150 aaKnown RBP13.12□□□□□ -0.31
USE1-202ENST00000445667 ART1P52961 327 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 OR2B6P58173 313 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 CSNK2A1P68400 391 aaPredicted RBP13.12□□□□□ -0.31
USE1-202ENST00000445667 IRX1P78414 480 aaPredicted RBP13.12□□□□□ -0.31
USE1-202ENST00000445667 LARS2Q15031 903 aaKnown RBP13.12□□□□□ -0.31
USE1-202ENST00000445667 DLEU7Q6UYE1 221 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 TFAP2EQ6VUC0 442 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 MTDHQ86UE4 582 aaKnown RBP13.12□□□□□ -0.31
USE1-202ENST00000445667 CXorf67Q86X51 503 aaPredicted RBP13.12□□□□□ -0.31
USE1-202ENST00000445667 ZNF440Q8IYI8 595 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 NFKBIDQ8NI38 313 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 STON2Q8WXE9 905 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 SPATA9Q9BWV2 254 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 RABEP2Q9H5N1 569 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 IKZF5Q9H5V7 419 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 PLEKHF2Q9H8W4 249 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 BCO1Q9HAY6 547 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 GP6Q9HCN6 339 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 BCL2L10Q9HD36 194 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 ZNF226Q9NYT6 803 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.12□□□□□ -0.31
USE1-202ENST00000445667 TRIM33Q9UPN9 1127 aa13.12□□□□□ -0.31
USE1-202ENST00000445667 ZC3H12DA2A288 527 aaKnown RBP13.11□□□□□ -0.31
USE1-202ENST00000445667 DEFB108AA8MXU0 73 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 GOSR1O95249 250 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 PMS2P2O95744 297 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 THBDP07204 575 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 THBS1P07996 1170 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 ARAFP10398 606 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 UQCRBP14927 111 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 CRYGSP22914 178 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 PPIBP23284 216 aaKnown RBP13.11□□□□□ -0.31
USE1-202ENST00000445667 EDNRAP25101 427 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 TSC22D1Q15714 1073 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 ZNF311Q5JNZ3 666 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 GCNT6Q5T4J0 391 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.11□□□□□ -0.31
USE1-202ENST00000445667 SERPINA11Q86U17 422 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 CCDC103Q8IW40 242 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 CADM2Q8N3J6 435 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 BBS10Q8TAM1 723 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 PIK3IP1Q96FE7 263 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 TMEM120AQ9BXJ8 343 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 RSPO3Q9BXY4 272 aaPredicted RBP13.11□□□□□ -0.31
USE1-202ENST00000445667 ADAM19Q9H013 955 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 CACYBPQ9HB71 228 aaKnown RBP13.11□□□□□ -0.31
USE1-202ENST00000445667 TMEM181Q9P2C4 612 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 IFT52Q9Y366 437 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 NDUFAF1Q9Y375 327 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 HDGFL3Q9Y3E1 203 aa13.11□□□□□ -0.31
USE1-202ENST00000445667 HRNRQ86YZ3 2850 aaPredicted RBP13.11□□□□□ -0.31
USE1-202ENST00000445667 EVPLLA8MZ36 301 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 ZNF814B7Z6K7 855 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 ZNF208O43345 1280 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 FRS3O43559 492 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 RAMP1O60894 148 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 GCM2O75603 506 aaPredicted RBP13.1□□□□□ -0.31
USE1-202ENST00000445667 ADAP00813 363 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 IMPDH2P12268 514 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 GPX2P18283 190 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 CXCR1P25024 350 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 FKBP2P26885 142 aaKnown RBP13.1□□□□□ -0.31
USE1-202ENST00000445667 CLK1P49759 484 aaKnown RBP13.1□□□□□ -0.31
USE1-202ENST00000445667 HOXC5Q00444 222 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 CDK6Q00534 326 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 BNIP2Q12982 314 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 RUNDC3AQ59EK9 446 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 RNF220Q5VTB9 566 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 PRAMEF8Q5VWM4 474 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 PRAMEF7Q5VXH5 474 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 RETREG3Q86VR2 466 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 GABRG1Q8N1C3 465 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 DDIT4LQ96D03 193 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 ZHX1-C8orf76Q96EF9 292 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 CPPED1Q9BRF8 314 aaPredicted RBP13.1□□□□□ -0.31
USE1-202ENST00000445667 SIKE1Q9BRV8 207 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 TACO1Q9BSH4 297 aaKnown RBP13.1□□□□□ -0.31
USE1-202ENST00000445667 ACTR6Q9GZN1 396 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 ARMC7Q9H6L4 198 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 FANCFQ9NPI8 374 aa13.1□□□□□ -0.31
USE1-202ENST00000445667 FGFR1OP2Q9NVK5 253 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms