RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 S100PBPQ96BU1 408 aa16.68■□□□□ 0.26
COMMD1-204ENST00000445644 TMEM19Q96HH6 336 aa16.68■□□□□ 0.26
COMMD1-204ENST00000445644 RSPO3Q9BXY4 272 aaPredicted RBP16.68■□□□□ 0.26
COMMD1-204ENST00000445644 OR10A4Q9H209 315 aa16.68■□□□□ 0.26
COMMD1-204ENST00000445644 SLC25A37Q9NYZ2 338 aa16.68■□□□□ 0.26
COMMD1-204ENST00000445644 OSGIN1Q9UJX0 560 aa16.68■□□□□ 0.26
COMMD1-204ENST00000445644 EDARQ9UNE0 448 aa16.68■□□□□ 0.26
COMMD1-204ENST00000445644 GPR52Q9Y2T5 361 aa16.68■□□□□ 0.26
COMMD1-204ENST00000445644 TMED7-TICAM2A0A0A6YYA0 188 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 TMEM72A0PK05 275 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 CDHR4A6H8M9 788 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 ZNF716A6NP11 495 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 FAAHO00519 579 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 RAMP1O60894 148 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 PMS2P2O95744 297 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 PLAUP00749 431 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 GKN3PP0CG01 181 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 CCNA2P20248 432 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 NTF4P34130 210 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 ACAA2P42765 397 aaKnown RBP16.67■□□□□ 0.26
COMMD1-204ENST00000445644 OR3A2P47893 321 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 AQP5P55064 265 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 SFRP5Q5T4F7 317 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 BLOC1S3Q6QNY0 202 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 SEZ6L2Q6UXD5 910 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 PMM1Q92871 262 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 CCDC28BQ9BUN5 200 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 SLAMF8Q9P0V8 285 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 ZNF443Q9Y2A4 671 aaPredicted RBP16.67■□□□□ 0.26
COMMD1-204ENST00000445644 TMED7Q9Y3B3 224 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 DSCAMO60469 2012 aa16.67■□□□□ 0.26
COMMD1-204ENST00000445644 ZC3H12DA2A288 527 aaKnown RBP16.66■□□□□ 0.26
COMMD1-204ENST00000445644 ZNF724A8MTY0 619 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 SASH3O75995 380 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 ADAP00813 363 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 TFPIP10646 304 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 IMPDH2P12268 514 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 TACR3P29371 465 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 CRISP3P54108 245 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 PPP2R2AP63151 447 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 CSNK2A1P68400 391 aaPredicted RBP16.66■□□□□ 0.26
COMMD1-204ENST00000445644 FOXD4Q12950 439 aaPredicted RBP16.66■□□□□ 0.26
COMMD1-204ENST00000445644 RGNQ15493 299 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 PAGE3Q5JUK9 113 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 LRIF1Q5T3J3 769 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 HDXQ7Z353 690 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 MTDHQ86UE4 582 aaKnown RBP16.66■□□□□ 0.26
COMMD1-204ENST00000445644 WFDC8Q8IUA0 241 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 PEX5LQ8IYB4 626 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 WFDC11Q8NEX6 87 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 OR52P1PQ8NH57 321 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 TACO1Q9BSH4 297 aaKnown RBP16.66■□□□□ 0.26
COMMD1-204ENST00000445644 ADAM19Q9H013 955 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 UBTD1Q9HAC8 227 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 DLL4Q9NR61 685 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 CCDC167Q9P0B6 97 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 HDGFL3Q9Y3E1 203 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 SPIN1Q9Y657 262 aaPredicted RBP16.66■□□□□ 0.26
COMMD1-204ENST00000445644 ZFHX3Q15911 3703 aa16.66■□□□□ 0.26
COMMD1-204ENST00000445644 IGKV3D-15A0A087WSY6 115 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 A0A096LPI6 279 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 CFAP73A6NFT4 308 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 HMGB1P1B2RPK0 211 aaPredicted RBP16.65■□□□□ 0.26
COMMD1-204ENST00000445644 CLIC1O00299 241 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 BMP2P12643 396 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 PRG2P13727 222 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 CD99P14209 185 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 HOXC12P31275 282 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 SLC1A3P43003 542 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 POLR2HP52434 150 aaKnown RBP16.65■□□□□ 0.26
COMMD1-204ENST00000445644 STX1BP61266 288 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 H3F3AP84243 136 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 ACKR1Q16570 336 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 LIN52Q52LA3 116 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 BEX5Q5H9J7 111 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 RNF220Q5VTB9 566 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 ATG4DQ86TL0 474 aaPredicted RBP16.65■□□□□ 0.26
COMMD1-204ENST00000445644 CCDC103Q8IW40 242 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 CLIP4Q8N3C7 705 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 CKAP2Q8WWK9 683 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 IGFBPL1Q8WX77 278 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 MAL2Q969L2 176 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 SPDL1Q96EA4 605 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 PLPPR2Q96GM1 343 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 TMEM204Q9BSN7 226 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 VIPAS39Q9H9C1 493 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 INTS9Q9NV88 658 aaKnown RBP16.65■□□□□ 0.26
COMMD1-204ENST00000445644 BEX4Q9NWD9 120 aaPredicted RBP16.65■□□□□ 0.26
COMMD1-204ENST00000445644 CALML5Q9NZT1 146 aa16.65■□□□□ 0.26
COMMD1-204ENST00000445644 TRBV5-3A0A0A0MS03 114 aa16.64■□□□□ 0.25
COMMD1-204ENST00000445644 NR5A2O00482 541 aa16.64■□□□□ 0.25
COMMD1-204ENST00000445644 HTR3AP46098 478 aa16.64■□□□□ 0.25
COMMD1-204ENST00000445644 CLK1P49759 484 aaKnown RBP16.64■□□□□ 0.25
COMMD1-204ENST00000445644 GNA13Q14344 377 aa16.64■□□□□ 0.25
COMMD1-204ENST00000445644 PDK3Q15120 406 aa16.64■□□□□ 0.25
COMMD1-204ENST00000445644 Q6ZT83 130 aa16.64■□□□□ 0.25
COMMD1-204ENST00000445644 STEAP2Q8NFT2 490 aa16.64■□□□□ 0.25
COMMD1-204ENST00000445644 DYDC1Q8WWB3 177 aa16.64■□□□□ 0.25
COMMD1-204ENST00000445644 THOC1Q96FV9 657 aaKnown RBP16.64■□□□□ 0.25
COMMD1-204ENST00000445644 IKZF5Q9H5V7 419 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms