RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 CD8B2A6NJW9 211 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 CXCL13O43927 109 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 UQCRBP14927 111 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 EIF1AXP47813 144 aaKnown RBP14.38□□□□□ -0.11
USP39-205ENST00000442708 CBX1P83916 185 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 HBMQ6B0K9 141 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 TMEM211Q6ICI0 200 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 ESPNLQ6ZVH7 1005 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 VTCN1Q7Z7D3 282 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 ATG4DQ86TL0 474 aaPredicted RBP14.38□□□□□ -0.11
USP39-205ENST00000442708 LSMEM1Q8N8F7 131 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 OR52E4Q8NGH9 312 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 OR2V1Q8NHB1 315 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 MBD3L2Q8NHZ7 208 aaPredicted RBP14.38□□□□□ -0.11
USP39-205ENST00000442708 FNDC9Q8TBE3 224 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 SSC4DQ8WTU2 575 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 OSTF1Q92882 214 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 TPD52L3Q96J77 140 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 ARL5BQ96KC2 179 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 ZNF559Q9BR84 538 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 PCDHAC1Q9H158 963 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 KLHL28Q9NXS3 571 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 Q9UFV3 132 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 TESQ9UGI8 421 aaKnown RBP14.38□□□□□ -0.11
USP39-205ENST00000442708 SLC13A4Q9UKG4 626 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 SH3GLB1Q9Y371 365 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 DOPEY1Q5JWR5 2465 aa14.38□□□□□ -0.11
USP39-205ENST00000442708 AQP8O94778 261 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 LYPD3O95274 346 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 SERPINA1P01009 418 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 IFNA14P01570 189 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 THY1P04216 161 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 KLK2P20151 261 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 CEACAM8P31997 349 aaPredicted RBP14.37□□□□□ -0.11
USP39-205ENST00000442708 HTR3AP46098 478 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 OR1E2P47887 323 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 COPZ1P61923 177 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 SELENOWP63302 87 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 BNIP1Q12981 228 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 PON3Q15166 354 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 OR1Q1Q15612 314 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 SYT14P1Q58G82 188 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 GLYATQ6IB77 296 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 CBLL1Q75N03 491 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 CARM1Q86X55 608 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 LIX1LQ8IVB5 337 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 FAM86B1Q8N7N1 296 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 RASSF5Q8WWW0 418 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 WNT2BQ93097 391 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 CLPTM1LQ96KA5 538 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 OR5B2Q96R09 309 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 MCHR1Q99705 422 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 C1orf21Q9H246 121 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 SERINC1Q9NRX5 453 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 STOML1Q9UBI4 398 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 PRDM4Q9UKN5 801 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 RNF6Q9Y252 685 aa14.37□□□□□ -0.11
USP39-205ENST00000442708 CPSF4LA6NMK7 179 aaKnown RBP14.36□□□□□ -0.11
USP39-205ENST00000442708 PDE5AO76074 875 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 ZNF682O95780 498 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 TFPIP10646 304 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 TIMP3P35625 211 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 PER3P56645 1201 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 CARD18P57730 90 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 ENTPD8Q5MY95 495 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 RIPPLY2Q5TAB7 128 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 MTFR2Q6P444 385 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 CHMP1BQ7LBR1 199 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 RANBP3LQ86VV4 465 aaPredicted RBP14.36□□□□□ -0.11
USP39-205ENST00000442708 EID3Q8N140 333 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 RND1Q92730 232 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 PROX1Q92786 737 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 FAM162AQ96A26 154 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 TRIM2Q9C040 744 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 EVA1AQ9H8M9 152 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 BAG5Q9UL15 447 aa14.36□□□□□ -0.11
USP39-205ENST00000442708 INTS1Q8N201 2190 aaKnown RBP14.35□□□□□ -0.11
USP39-205ENST00000442708 IGKV1D-42A0A075B6H8 117 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 A0A0B4J2E0 115 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 A0A1B0GX12 115 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 SLC22A20A6NK97 555 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 GJE1A6NN92 205 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 ARPC2O15144 300 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 ZNF208O43345 1280 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 FMO6PO60774 539 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 IMPDH2P12268 514 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 FUT4P22083 530 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 CXCR1P25024 350 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 SLC7A1P30825 629 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 CDH12P55289 794 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 RPS3AP61247 264 aaKnown RBP14.35□□□□□ -0.11
USP39-205ENST00000442708 FOXF2Q12947 444 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 MYBPHQ13203 477 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 SF3B4Q15427 424 aaKnown RBP eCLIP14.35□□□□□ -0.11
USP39-205ENST00000442708 SGCBQ16585 318 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 WDR88Q6ZMY6 472 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 MRGPRGQ86SM5 289 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 GCNT2Q8N0V5 402 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 SLC25A43Q8WUT9 341 aaPredicted RBP14.35□□□□□ -0.11
USP39-205ENST00000442708 ROBO4Q8WZ75 1007 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms