RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 CHST2Q9Y4C5 530 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 J3QRE1 110 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 UGT2B17O75795 530 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 C6orf47O95873 294 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 OPN1SWP03999 348 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 RHCEP18577 417 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 PTGS2P35354 604 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 BSGP35613 385 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 NUDT6P53370 316 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 SCARB2Q14108 478 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 LASP1Q14847 261 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 EXOSC7Q15024 291 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 Q5BKY6 102 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZMAT1Q5H9K5 638 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 SLC6A19Q695T7 634 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR5M10Q6IEU7 315 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 IGF2-ASQ6U949 168 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 RNF130Q86XS8 419 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 LGI4Q8N135 537 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR4K1Q8NGD4 311 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR4A15Q8NGL6 344 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 MYDGFQ969H8 173 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 SARAFQ96BY9 339 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 SGCZQ96LD1 299 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 NUDT9Q9BW91 350 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 SLC6A16Q9GZN6 736 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 NMNAT1Q9HAN9 279 aaPredicted RBP6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 LYRM4Q9HD34 91 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 CLEC2DQ9UHP7 191 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 ACSL6Q9UKU0 697 aa6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.78□□□□□ -1.32
CDC42BPA-208ENST00000442054 A0A1W2PNU3 283 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 MYO1GB0I1T2 1018 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 EEF1E1-BLOC1S5C9J1V9 151 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 CTDSP2O14595 271 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 EEF1E1O43324 174 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 KIAA0513O60268 411 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 CELA2AP08217 269 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 ELAVL4P26378 380 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 SERPINB10P48595 397 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 BAK1Q16611 211 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 OCLNQ16625 522 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 IFI44LQ53G44 452 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 PDSS1Q5T2R2 415 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 TMEM107Q6UX40 140 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 ATG16L2Q8NAA4 619 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 SLC2A12Q8TD20 617 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 GRHL3Q8TE85 626 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 LMF1Q96S06 567 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 CCDC32Q9BV29 185 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 IQCMA0A1B0GVH7 501 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 PRKNO60260 465 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZIC2O95409 532 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 CPMP14384 443 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 WT1P19544 449 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 SOX18P35713 384 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 GPR143P51810 404 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 CTBP2P56545 445 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 PSPHP78330 225 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 MLC1Q15049 377 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 AGAP6Q5VW22 663 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 MTFR2Q6P444 385 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 FAM111BQ6SJ93 734 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 LIX1LQ8IVB5 337 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 ARIH2OSQ8N7S6 290 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 ANKK1Q8NFD2 765 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 OR52R1Q8NGF1 315 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 NT5CQ8TCD5 201 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 C17orf50Q8WW18 174 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 TPD52L3Q96J77 140 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 SLC35A5Q9BS91 424 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 AMBNQ9NP70 447 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 TEX10Q9NXF1 929 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 LIPT1Q9Y234 373 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 LRP4O75096 1905 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 DNAJC13O75165 2243 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 AKAP6Q13023 2319 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZNF462Q96JM2 2506 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 INTS1Q8N201 2190 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 HMGN4O00479 90 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 TBX1O43435 398 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 HCRTR2O43614 444 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 FGF17O60258 216 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 ENTPD6O75354 484 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 SYNGR4O95473 234 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 TNFSF8P32971 234 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZNF41P51814 821 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 CRISP1P54107 249 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 LSM11P83369 360 aaKnown RBP eCLIP6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 CDK5Q00535 292 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 GPR68Q15743 365 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZNF630Q2M218 657 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 CYP27C1Q4G0S4 372 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 PGBD2Q6P3X8 592 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 RTL4Q6ZR62 310 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 QSOX2Q6ZRP7 698 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 IKBIPQ70UQ0 350 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 TRILQ7L0X0 811 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 ADCK1Q86TW2 530 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms