RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 CD3GP09693 182 aa15.22■□□□□ 0.03
SEMA3B-207ENST00000441915 MAP3K8P41279 467 aa15.22■□□□□ 0.03
SEMA3B-207ENST00000441915 MMP15P51511 669 aa15.22■□□□□ 0.03
SEMA3B-207ENST00000441915 ARF3P61204 181 aaPredicted RBP15.22■□□□□ 0.03
SEMA3B-207ENST00000441915 PLAURQ03405 335 aa15.22■□□□□ 0.03
SEMA3B-207ENST00000441915 C9orf62Q8N4C0 152 aa15.22■□□□□ 0.03
SEMA3B-207ENST00000441915 HSD17B8Q92506 261 aa15.22■□□□□ 0.03
SEMA3B-207ENST00000441915 YIPF5Q969M3 257 aa15.22■□□□□ 0.03
SEMA3B-207ENST00000441915 ZFP3Q96NJ6 502 aa15.22■□□□□ 0.03
SEMA3B-207ENST00000441915 POLE3Q9NRF9 147 aa15.22■□□□□ 0.03
SEMA3B-207ENST00000441915 COPZ2Q9P299 210 aa15.22■□□□□ 0.03
SEMA3B-207ENST00000441915 TEKT2Q9UIF3 430 aa15.22■□□□□ 0.03
SEMA3B-207ENST00000441915 ST6GALNAC2Q9UJ37 374 aa15.22■□□□□ 0.03
SEMA3B-207ENST00000441915 ZNF222Q9UK12 451 aa15.22■□□□□ 0.03
SEMA3B-207ENST00000441915 A0A1W2PPK0 400 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 OR6C74A6NCV1 312 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 H0Y8X5 98 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 K7EQS6 105 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 SHOXO15266 292 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 ARL6IP5O75915 188 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 HOXC4P09017 264 aaPredicted RBP15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 CT62P0C5K7 136 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 NFATC4Q14934 902 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 TP53I3Q53FA7 332 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 ZAR1Q86SH2 424 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 SHISA5Q8N114 240 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 ZNF655Q8N720 491 aaPredicted RBP15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 OR5T3Q8NGG3 340 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 WDR92Q96MX6 357 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 PTCHD1Q96NR3 888 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 ERMAPQ96PL5 475 aaPredicted RBP15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 TTTY10Q9BZA0 68 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 TMEM168Q9H0V1 697 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 RANBP3Q9H6Z4 567 aaPredicted RBP15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 EVA1AQ9H8M9 152 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 DIABLOQ9NR28 239 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 FLRT3Q9NZU0 649 aa15.21■□□□□ 0.03
SEMA3B-207ENST00000441915 XIRP2A4UGR9 3374 aa15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 TEX13CA0A0J9YWL9 993 aa15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 CYR61O00622 381 aa15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 FLRT2O43155 660 aa15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 ACTA2P62736 377 aa15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 ACTG2P63267 376 aa15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 CRYZQ08257 329 aaKnown RBP15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 GAS6Q14393 721 aa15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 ALG10BQ5I7T1 473 aa15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 SLC43A2Q8N370 569 aa15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 OR52E2Q8NGJ4 325 aa15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 FAM3CQ92520 227 aa15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 SMIM19Q96E16 107 aa15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 SMAD5Q99717 465 aaKnown RBP15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 IL21RQ9HBE5 538 aa15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 BRD7Q9NPI1 651 aa15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 CA5BQ9Y2D0 317 aa15.21■□□□□ 0.02
SEMA3B-207ENST00000441915 EPXP11678 715 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 CTRB1P17538 263 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 ATF1P18846 271 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 NTSR1P30989 418 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 RBM34P42696 430 aaKnown RBP15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 GBX2P52951 348 aaPredicted RBP15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 MGAT2Q10469 447 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 RNASE12Q5GAN4 147 aaKnown RBP15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 TMEM196Q5HYL7 178 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 CTRB2Q6GPI1 263 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 FAM98AQ8NCA5 519 aaKnown RBP15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 SDR9C7Q8NEX9 313 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 ZMYND19Q96E35 227 aaPredicted RBP15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 ZNF426Q9BUY5 554 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 TRIM2Q9C040 744 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 MCCC2Q9HCC0 563 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 C12orf4Q9NQ89 552 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 SLC23A1Q9UHI7 598 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 TSC22D2O75157 780 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 TSPAN9O75954 239 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 NKX2-2O95096 273 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 RASGRP1O95267 797 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 OR2T7P0C7T2 308 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 SNRPBP14678 240 aaKnown RBP15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 GIFP27352 417 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 TNFRSF4P43489 277 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 GDI2P50395 445 aaKnown RBP15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 AP2S1P53680 142 aaPredicted RBP15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 HCCSP53701 268 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 GPR18Q14330 331 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 CDK5R1Q15078 307 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 ZNF782Q6ZMW2 699 aaPredicted RBP15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 SIAH3Q8IW03 269 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 RFLNBQ8N5W9 214 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 OR11H7Q8NGC8 314 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 OR2T27Q8NH04 317 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 ZNF431Q8TF32 576 aaPredicted RBP15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 CTHRC1Q96CG8 243 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 OR2M2Q96R28 347 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 MYADMQ96S97 322 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 CACNG6Q9BXT2 260 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 EMC7Q9NPA0 242 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 SERTAD3Q9UJW9 196 aa15.2■□□□□ 0.02
SEMA3B-207ENST00000441915 LRRN3E7EW58 273 aa15.19■□□□□ 0.02
SEMA3B-207ENST00000441915 TRANK1O15050 2925 aa15.19■□□□□ 0.02
SEMA3B-207ENST00000441915 OGG1O15527 345 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms