RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 ADAP2Q9NPF8 381 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 EQTNQ9NQ60 294 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 PNO1Q9NRX1 252 aaKnown RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 C14orf105Q9NVL8 296 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF223Q9UK11 482 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 PCDHGB4Q9UN71 923 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 C19orf53Q9UNZ5 99 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 ERVK-19Q9WJR5 959 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 MRPS33Q9Y291 106 aaKnown RBP4.33□□□□□ -1.72
PTPN4-206ENST00000441089 DTX4Q9Y2E6 619 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 DOCK7Q96N67 2140 aa4.33□□□□□ -1.72
PTPN4-206ENST00000441089 A0A087WV62 115 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 LOC102723996A0A087X1L8 192 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 GXYLT2A0PJZ3 443 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 ELOVL7A1L3X0 281 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 EVPLLA8MZ36 301 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 C17orf105B2RV13 164 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 H3BNX3 289 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 HMGN4O00479 90 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 CXCR6O00574 342 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 PRKNO60260 465 aaPredicted RBP4.32□□□□□ -1.72
PTPN4-206ENST00000441089 MGRN1O60291 552 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 OR10H2O60403 315 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 KRT36O76013 467 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 KRT75O95678 551 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 KNG1P01042 644 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 HRGP04196 525 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 IGKV3-11P04433 115 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 IFNA16P05015 189 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 CHRM4P08173 479 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 TFPTP0C1Z6 253 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 ITGAMP11215 1152 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 COX6A1P12074 109 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 NAT1P18440 290 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 MATN1P21941 496 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 PPIBP23284 216 aaKnown RBP4.32□□□□□ -1.72
PTPN4-206ENST00000441089 ACVR2AP27037 513 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 GALNSP34059 522 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 PCGF2P35227 344 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 CHI3L1P36222 383 aaPredicted RBP4.32□□□□□ -1.72
PTPN4-206ENST00000441089 CRATP43155 626 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 EMDP50402 254 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 ASCL1P50553 236 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 GPR143P51810 404 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 EMP2P54851 167 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 DSTNP60981 165 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 SUMO1P63165 101 aaKnown RBP4.32□□□□□ -1.72
PTPN4-206ENST00000441089 PSG6Q00889 435 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 OCA2Q04671 838 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 TRAP1Q12931 704 aaKnown RBP4.32□□□□□ -1.72
PTPN4-206ENST00000441089 BNIP2Q12982 314 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 FADDQ13158 208 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 TUBA3CQ13748 450 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 OR1C1Q15619 314 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 NSDHLQ15738 373 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 SYPL1Q16563 259 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 SMN1Q16637 294 aaKnown RBP4.32□□□□□ -1.72
PTPN4-206ENST00000441089 DUSP5Q16690 384 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 CYP51A1Q16850 503 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 FBXL19-AS1Q494R0 122 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 SFT2D3Q587I9 215 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 GCNT6Q5T4J0 391 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 CCNJQ5T5M9 372 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 C1orf146Q5VVC0 180 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 GLYATQ6IB77 296 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 LCN8Q6JVE9 175 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 CDC73Q6P1J9 531 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 TUBA3EQ6PEY2 450 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 TMEM205Q6UW68 189 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 ANGPTL8Q6UXH0 198 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 NPSR1Q6W5P4 371 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 SPATC1Q76KD6 591 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 SZRD1Q7Z422 152 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 GALNTL5Q7Z4T8 443 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 MEX3DQ86XN8 651 aaKnown RBP4.32□□□□□ -1.72
PTPN4-206ENST00000441089 C9orf40Q8IXQ3 194 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 ADGRG5Q8IZF4 528 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 RPRMLQ8N4K4 120 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 TRIML2Q8N7C3 387 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 FAM86B1Q8N7N1 296 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 ANKFN1Q8N957 763 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 NFAM1Q8NET5 270 aaPredicted RBP4.32□□□□□ -1.72
PTPN4-206ENST00000441089 OR56A1Q8NGH5 318 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 NFKBIDQ8NI38 313 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF721Q8TF20 911 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 FIG4Q92562 907 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 RIT1Q92963 219 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 SLCO4A1Q96BD0 722 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 C8orf44Q96CB5 159 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 TMEM19Q96HH6 336 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 SENP5Q96HI0 755 aaPredicted RBP4.32□□□□□ -1.72
PTPN4-206ENST00000441089 VSTM2LQ96N03 204 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 MS4A4EQ96PG1 132 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 OR7D2Q96RA2 312 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 CCL19Q99731 98 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 SH3GL1Q99961 368 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 PELOQ9BRX2 385 aaKnown RBP4.32□□□□□ -1.72
PTPN4-206ENST00000441089 TTYH2Q9BSA4 534 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 CNPPD1Q9BV87 410 aa4.32□□□□□ -1.72
PTPN4-206ENST00000441089 ITPAQ9BY32 194 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms