RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 ZNF626Q68DY1 528 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 GSG1LQ6UXU4 331 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 HMGN2P46Q86SG4 172 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 SUN3Q8TAQ9 357 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 PIGKQ92643 395 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 DIO2Q92813 273 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 LRRC46Q96FV0 321 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 TBX5Q99593 518 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 C12orf57Q99622 126 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 ARL6Q9H0F7 186 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 DPEP2Q9H4A9 486 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 SLC6A20Q9NP91 592 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 ACSS1Q9NUB1 689 aaPredicted RBP11.01□□□□□ -0.65
LTBR-203ENST00000441074 ARPC4-TTLL3A0A0A6YYG9 625 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 A0A1B0GW55 424 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 FAM183AA6NL82 134 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 SYT5O00445 386 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 ARPC5O15511 151 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 KDM4BO94953 1096 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 KAT7O95251 611 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 NTN1O95631 604 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 DUX4L2P0CJ85 424 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 DUX4L3P0CJ86 424 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 DUX4L4P0CJ87 422 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 DUX4L5P0CJ88 424 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 DUX4L6P0CJ89 424 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 DUX4L7P0CJ90 424 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 TFF2Q03403 129 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 FGL1Q08830 312 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 MLC1Q15049 377 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 DECR1Q16698 335 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 HNRNPA1L2Q32P51 320 aaKnown RBP11.01□□□□□ -0.65
LTBR-203ENST00000441074 PIP5KL1Q5T9C9 394 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 NIPAL3Q6P499 406 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 CFAP206Q8IYR0 622 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 SMRP1Q8NCR6 262 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 C7orf57Q8NEG2 295 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 THEM6Q8WUY1 208 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 PNPLA2Q96AD5 504 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 EXOSC8Q96B26 276 aaKnown RBP11.01□□□□□ -0.65
LTBR-203ENST00000441074 ZNF514Q96K75 400 aaPredicted RBP11.01□□□□□ -0.65
LTBR-203ENST00000441074 PGLYRP3Q96LB9 341 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 DNTTIP1Q9H147 329 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 RHBGQ9H310 441 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 EXOSC3Q9NQT5 275 aaKnown RBP11.01□□□□□ -0.65
LTBR-203ENST00000441074 DUX4Q9UBX2 424 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 NDRG3Q9UGV2 375 aa11.01□□□□□ -0.65
LTBR-203ENST00000441074 PCDHGA9Q9Y5G4 932 aaKnown RBP11.01□□□□□ -0.65
LTBR-203ENST00000441074 VPS13AQ96RL7 3174 aa11□□□□□ -0.65
LTBR-203ENST00000441074 A0A0G2JPF8 293 aa11□□□□□ -0.65
LTBR-203ENST00000441074 C17orf113A0A1B0GUU1 675 aa11□□□□□ -0.65
LTBR-203ENST00000441074 CHURC1-FNTBB4DL54 471 aa11□□□□□ -0.65
LTBR-203ENST00000441074 HNRNPCL3B7ZW38 293 aa11□□□□□ -0.65
LTBR-203ENST00000441074 GATBO75879 557 aaKnown RBP11□□□□□ -0.65
LTBR-203ENST00000441074 ATP1B1P05026 303 aa11□□□□□ -0.65
LTBR-203ENST00000441074 POU2F2P09086 479 aa11□□□□□ -0.65
LTBR-203ENST00000441074 HNRNPCL4P0DMR1 293 aa11□□□□□ -0.65
LTBR-203ENST00000441074 NDUFV2P19404 249 aa11□□□□□ -0.65
LTBR-203ENST00000441074 AHRP35869 848 aa11□□□□□ -0.65
LTBR-203ENST00000441074 KHKP50053 298 aa11□□□□□ -0.65
LTBR-203ENST00000441074 MECP2P51608 486 aaKnown RBP11□□□□□ -0.65
LTBR-203ENST00000441074 NRG3P56975 720 aa11□□□□□ -0.65
LTBR-203ENST00000441074 GPR85P60893 370 aa11□□□□□ -0.65
LTBR-203ENST00000441074 C2orf27AQ580R0 203 aa11□□□□□ -0.65
LTBR-203ENST00000441074 UBE2NLQ5JXB2 153 aa11□□□□□ -0.65
LTBR-203ENST00000441074 KHDRBS2Q5VWX1 349 aaKnown RBP11□□□□□ -0.65
LTBR-203ENST00000441074 ZNF660Q6AZW8 331 aaPredicted RBP11□□□□□ -0.65
LTBR-203ENST00000441074 PLBD1Q6P4A8 553 aa11□□□□□ -0.65
LTBR-203ENST00000441074 TRMT11Q7Z4G4 463 aaKnown RBP11□□□□□ -0.65
LTBR-203ENST00000441074 PAQR7Q86WK9 346 aa11□□□□□ -0.65
LTBR-203ENST00000441074 FAM129CQ86XR2 697 aa11□□□□□ -0.65
LTBR-203ENST00000441074 YAF2Q8IY57 180 aa11□□□□□ -0.65
LTBR-203ENST00000441074 IZUMO1Q8IYV9 350 aa11□□□□□ -0.65
LTBR-203ENST00000441074 EID2Q8N6I1 236 aa11□□□□□ -0.65
LTBR-203ENST00000441074 C17orf47Q8NEP4 570 aa11□□□□□ -0.65
LTBR-203ENST00000441074 OR10H4Q8NGA5 316 aa11□□□□□ -0.65
LTBR-203ENST00000441074 ACOT11Q8WXI4 607 aaPredicted RBP11□□□□□ -0.65
LTBR-203ENST00000441074 WDR89Q96FK6 387 aaPredicted RBP11□□□□□ -0.65
LTBR-203ENST00000441074 DTD2Q96FN9 168 aa11□□□□□ -0.65
LTBR-203ENST00000441074 LINC00615Q96LM1 132 aaPredicted RBP11□□□□□ -0.65
LTBR-203ENST00000441074 ARHGDIGQ99819 225 aa11□□□□□ -0.65
LTBR-203ENST00000441074 MFRPQ9BY79 579 aa11□□□□□ -0.65
LTBR-203ENST00000441074 SLC25A32Q9H2D1 315 aa11□□□□□ -0.65
LTBR-203ENST00000441074 PELI2Q9HAT8 420 aa11□□□□□ -0.65
LTBR-203ENST00000441074 C5AR2Q9P296 337 aa11□□□□□ -0.65
LTBR-203ENST00000441074 CD207Q9UJ71 328 aa11□□□□□ -0.65
LTBR-203ENST00000441074 SLC6A5Q9Y345 797 aa11□□□□□ -0.65
LTBR-203ENST00000441074 ATG2BQ96BY7 2078 aa11□□□□□ -0.65
LTBR-203ENST00000441074 ANKRD61A6NGH8 418 aa11□□□□□ -0.65
LTBR-203ENST00000441074 CPSF4LA6NMK7 179 aaKnown RBP11□□□□□ -0.65
LTBR-203ENST00000441074 GABARAPH6UMI1 98 aa11□□□□□ -0.65
LTBR-203ENST00000441074 H7C2Y5 167 aa11□□□□□ -0.65
LTBR-203ENST00000441074 FLRT2O43155 660 aa11□□□□□ -0.65
LTBR-203ENST00000441074 LILRB5O75023 590 aa11□□□□□ -0.65
LTBR-203ENST00000441074 MAT2AP31153 395 aaKnown RBP11□□□□□ -0.65
LTBR-203ENST00000441074 BSGP35613 385 aa11□□□□□ -0.65
LTBR-203ENST00000441074 RPL35P42766 123 aaKnown RBP11□□□□□ -0.65
LTBR-203ENST00000441074 GPR4P46093 362 aa11□□□□□ -0.65
LTBR-203ENST00000441074 DLX5P56178 289 aa11□□□□□ -0.65
LTBR-203ENST00000441074 DEFA5Q01523 94 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms