RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 SLC2A5P22732 501 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 CCR4P51679 360 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 RPS4XP62701 263 aaKnown RBP10.77□□□□□ -0.69
SMAD3-202ENST00000439724 ITGADQ13349 1161 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 ISXQ2M1V0 245 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 ANKDD1AQ495B1 522 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 TRIM61Q5EBN2 209 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 LIPKQ5VXJ0 399 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 NUP54Q7Z3B4 507 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 PPP1R3BQ86XI6 285 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 KLHL36Q8N4N3 616 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 TMCO5AQ8N6Q1 288 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 SIRT6Q8N6T7 355 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 TMEM105Q8N8V8 129 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 DTWD2Q8NBA8 298 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 SLC37A3Q8NCC5 494 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 NFAM1Q8NET5 270 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-202ENST00000439724 FNDC8Q8TC99 324 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 TM9SF4Q92544 642 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 PTP4A1Q93096 173 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 GFM1Q96RP9 751 aaKnown RBP10.77□□□□□ -0.69
SMAD3-202ENST00000439724 CDADC1Q9BWV3 514 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 HCAR1Q9BXC0 346 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 SLC26A1Q9H2B4 701 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 ERVK13-1Q9NX77 482 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 CHRNA9Q9UGM1 479 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 KLHL21Q9UJP4 597 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 ZNF337Q9Y3M9 751 aa10.77□□□□□ -0.69
SMAD3-202ENST00000439724 SPIN1Q9Y657 262 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-202ENST00000439724 CDC14CA4D256 554 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 D6RAR5 112 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 J3QRK9 145 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 SYPP08247 313 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 FGF5P12034 268 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 BMP4P12644 408 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 MST1P26927 711 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 ABCD3P28288 659 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 SOX6P35712 828 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 ATP6V1E1P36543 226 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 RNF4P78317 190 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 ZNF117Q03924 483 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 TRA2AQ13595 282 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMAD3-202ENST00000439724 CRMP1Q14194 572 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 FAAH2Q6GMR7 532 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 DESI1Q6ICB0 168 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 C16orf87Q6PH81 154 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 DPY19L2P2Q6ZN68 376 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 SHISA6Q6ZSJ9 500 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 LHFPL3Q86UP9 236 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 IGFN1Q86VF2 1251 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 ACBD7Q8N6N7 88 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 GATAD2BQ8WXI9 593 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 UFD1Q92890 307 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 OTULINQ96BN8 352 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 ERMAPQ96PL5 475 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-202ENST00000439724 GPX7Q96SL4 187 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-202ENST00000439724 SECISBP2Q96T21 854 aaKnown RBP10.76□□□□□ -0.69
SMAD3-202ENST00000439724 ADAM19Q9H013 955 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 MED20Q9H944 212 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 EXOSC4Q9NPD3 245 aaKnown RBP10.76□□□□□ -0.69
SMAD3-202ENST00000439724 INPP5EQ9NRR6 644 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 HAO2Q9NYQ3 351 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 SSR3Q9UNL2 185 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 CAB39Q9Y376 341 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-202ENST00000439724 SF3B6Q9Y3B4 125 aaKnown RBP10.76□□□□□ -0.69
SMAD3-202ENST00000439724 EXPH5Q8NEV8 1989 aa10.76□□□□□ -0.69
SMAD3-202ENST00000439724 IGHV3-20A0A0C4DH32 117 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 OR6C70A6NIJ9 312 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 MCIDASD6RGH6 385 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 ZNF670-ZNF695F2Z2N8 137 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 WWP2O00308 870 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 ARPC3O15145 178 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 NDUFB5O43674 189 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 AKAP8O43823 692 aaKnown RBP10.75□□□□□ -0.69
SMAD3-202ENST00000439724 FADS1O60427 444 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 NOS3P29474 1203 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 CD79BP40259 229 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 EMP2P54851 167 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 PRPS1P60891 318 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 BDH1Q02338 343 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 IL11RAQ14626 422 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 ZNF74Q16587 644 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 PHF19Q5T6S3 580 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 LRRC17Q8N6Y2 441 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 APCDD1LQ8NCL9 501 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 OR51G2Q8NGK0 314 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 OR5M3Q8NGP4 307 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 ZNF563Q8TA94 476 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 NUBPLQ8TB37 319 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 METTL21AQ8WXB1 218 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 NACC2Q96BF6 587 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 RNF31Q96EP0 1072 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 TRMT61AQ96FX7 289 aaKnown RBP10.75□□□□□ -0.69
SMAD3-202ENST00000439724 ASPNQ9BXN1 380 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 TBL1XR1Q9BZK7 514 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 RTN4RQ9BZR6 473 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 OCIAD1Q9NX40 245 aa10.75□□□□□ -0.69
SMAD3-202ENST00000439724 ASCC3Q8N3C0 2202 aaKnown RBP10.75□□□□□ -0.69
SMAD3-202ENST00000439724 A0A075B6Q4 140 aa10.74□□□□□ -0.69
SMAD3-202ENST00000439724 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms