RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CHST8Q9H2A9 424 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 TMEM185BQ9H7F4 350 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 IFT46Q9NQC8 304 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLC7A7Q9UM01 511 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 FKBP7Q9Y680 259 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 FNDC1Q4ZHG4 1894 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 GXYLT2A0PJZ3 443 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 C4orf51C9J302 202 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 IMPA2O14732 288 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 PPM1BO75688 479 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 TBX6O95947 436 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 SHC2P98077 582 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 SORDQ00796 357 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 FCRLAQ7L513 359 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 PRSS41Q7RTY9 318 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 ACBD7Q8N6N7 88 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 PFN4Q8NHR9 129 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 IL21RQ9HBE5 538 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 SIRT3Q9NTG7 399 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLC39A1Q9NY26 324 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 APOBEC3BQ9UH17 382 aaKnown RBP9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 A4GNTQ9UNA3 340 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 FARSAQ9Y285 508 aaKnown RBP9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 PCDHGB7Q9Y5F8 929 aa9.21□□□□□ -0.94
CDC42SE1-202ENST00000439374 REV3LO60673 3130 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 TRABD2BA6NFA1 517 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 STK25O00506 426 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 RNF13O43567 381 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 ZNF35P13682 527 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 RAB3BP20337 219 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 AHCYP23526 432 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 TRHRP34981 398 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 TPMTP51580 245 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 LBX1P52954 281 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 SNRPNP63162 240 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 DMRTC1Q5HYR2 192 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 HEPHL1Q6MZM0 1159 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 GDPGP1Q6ZNW5 385 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 TAF8Q7Z7C8 310 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 SDR9C7Q8NEX9 313 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR2L3Q8NG85 312 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR13C2Q8NGS9 318 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR52I2Q8NH67 350 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 RLN3Q8WXF3 142 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 CREB3L1Q96BA8 519 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 AIFM2Q9BRQ8 373 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 PBX4Q9BYU1 374 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 PCBD2Q9H0N5 130 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 DLL4Q9NR61 685 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 FBXO34Q9NWN3 711 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 KCMF1Q9P0J7 381 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 NDOR1Q9UHB4 597 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 GPR160Q9UJ42 338 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 ACSL5Q9ULC5 683 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 ASXL3Q9C0F0 2248 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 C17orf113A0A1B0GUU1 675 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 hCG_1807616A0A1W2PRN6 198 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 CDC42EP2O14613 210 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 RGS9O75916 674 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 TPOP07202 933 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 EDNRAP25101 427 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 TLX1P31314 330 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 GABRA3P34903 492 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 STAT5AP42229 794 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 ZNF155Q12901 538 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 SCGB2B2Q4G0G5 96 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 ENTPD8Q5MY95 495 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 AGBL4Q5VU57 503 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 TEX19Q8NA77 164 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 RERGQ96A58 199 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 GAS2L1Q99501 681 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 APOOQ9BUR5 198 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 C20orf85Q9H1P6 137 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 LHX9Q9NQ69 397 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLCO1C1Q9NYB5 712 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 ARHGEF17Q96PE2 2063 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 PLXND1Q9Y4D7 1925 aa9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 TCF20Q9UGU0 1960 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-202ENST00000439374 A0A1B0GTH9 108 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 PPP1R3DO95685 299 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 CTSEP14091 401 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ATF1P18846 271 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 IFNGR2P38484 337 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 PTH2RP49190 550 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 PDE7AQ13946 482 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ZNF776Q68DI1 518 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ABHD17CQ6PCB6 329 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 IKBIPQ70UQ0 350 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ETFBKMTQ8IXQ9 262 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR52L1Q8NGH7 329 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 CNOT9Q92600 299 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 MS4A6EQ96DS6 147 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 WDFY2Q96P53 400 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ARHGAP9Q9BRR9 750 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ZNF436Q9C0F3 470 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLC6A20Q9NP91 592 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 HRASLS2Q9NWW9 162 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 NTMQ9P121 344 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 RPS6KB2Q9UBS0 482 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ELF5Q9UKW6 265 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms