RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 AP4B1Q9Y6B7 739 aa11.47□□□□□ -0.57
SCLT1-202ENST00000439369 A0A087WUU8 490 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 TRBV4-1A0A0J9YWV2 114 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 A0A1B0GVC2 190 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 NPIPB7O75200 414 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 ATP6V1G2O95670 118 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 BAG2O95816 211 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 RFC3P40938 356 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 RAC1P63000 192 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 MICAQ29983 383 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 CMPK2Q5EBM0 449 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 HMBOX1Q6NT76 420 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 PODNL1Q6PEZ8 512 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 ZNF730Q6ZMV8 503 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 RRM2BQ7LG56 351 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 AMIGO2Q86SJ2 522 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 YRDCQ86U90 279 aaKnown RBP11.46□□□□□ -0.57
SCLT1-202ENST00000439369 ZDHHC13Q8IUH4 622 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 Q8NA96 180 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 NEIL3Q8TAT5 605 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 DNAJC9Q8WXX5 260 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 SDCCAG3Q96C92 435 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 DDIT4LQ96D03 193 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 SFXN2Q96NB2 322 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 TAAR6Q96RI8 345 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 UBL7Q96S82 380 aaPredicted RBP11.46□□□□□ -0.57
SCLT1-202ENST00000439369 VNN3Q9NY84 501 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 RHCGQ9UBD6 479 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 MED31Q9Y3C7 131 aa11.46□□□□□ -0.57
SCLT1-202ENST00000439369 HEATR5AQ86XA9 2040 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 EML6Q6ZMW3 1958 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 IGKV1D-42A0A075B6H8 117 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 TRGV5A0A0B4J1U4 118 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 H0Y3Z8 333 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 CASQ2O14958 399 aaPredicted RBP11.45□□□□□ -0.58
SCLT1-202ENST00000439369 OR2T1O43869 369 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 FZD7O75084 574 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 CCNB2O95067 398 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 PEPDP12955 493 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 CTBP2P56545 445 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 PMP22Q01453 160 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 SLC34A1Q06495 639 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 MFSD13AQ14CX5 517 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 EXOC3L2Q2M3D2 409 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 KRTCAP3Q53RY4 240 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 WIPI1Q5MNZ9 446 aaPredicted RBP11.45□□□□□ -0.58
SCLT1-202ENST00000439369 ZNF324BQ6AW86 544 aaPredicted RBP11.45□□□□□ -0.58
SCLT1-202ENST00000439369 PCSK4Q6UW60 755 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 WDR88Q6ZMY6 472 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 TRILQ7L0X0 811 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 NKAIN4Q8IVV8 208 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 CDK20Q8IZL9 346 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 OR4K5Q8NGD3 323 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 PIGXQ8TBF5 258 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 RNF217Q8TC41 542 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 GIPC3Q8TF64 312 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 TMEM255BQ8WV15 326 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 GABARAPL1Q9H0R8 117 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 RPH3AQ9Y2J0 694 aaPredicted RBP11.45□□□□□ -0.58
SCLT1-202ENST00000439369 HDGFL3Q9Y3E1 203 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 NINQ8N4C6 2090 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 CACNA1GO43497 2377 aa11.45□□□□□ -0.58
SCLT1-202ENST00000439369 ASPMQ8IZT6 3477 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 TRAV36DV7A0A075B6V5 113 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 TMEM72A0PK05 275 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 OR14I1A6ND48 311 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 G3V2T6 193 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 AQP7O14520 342 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 DNPH1O43598 174 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 AHSA1O95433 338 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 MT-ATP6P00846 226 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 CELA3AP09093 270 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 ANXA8P13928 327 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 ZNF23P17027 643 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 PRKCDQ05655 676 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 SYT14P1Q58G82 188 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 FAM69AQ5T7M9 428 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 C1orf140Q5VVS0 124 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 VASNQ6EMK4 673 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 ZNF770Q6IQ21 691 aaPredicted RBP11.44□□□□□ -0.58
SCLT1-202ENST00000439369 TMPRSS11FQ6ZWK6 438 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 OR52J3Q8NH60 311 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 LIPHQ8WWY8 451 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 BARD1Q99728 777 aaKnown RBP11.44□□□□□ -0.58
SCLT1-202ENST00000439369 NPAS1Q99742 590 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 C9orf16Q9BUW7 83 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 DGCR6LQ9BY27 220 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 SLC6A15Q9H2J7 730 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 MGAT4BQ9UQ53 548 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 TRAPPC4Q9Y296 219 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 ZNF337Q9Y3M9 751 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 U3KQV3 271 aa11.44□□□□□ -0.58
SCLT1-202ENST00000439369 CNTRLQ7Z7A1 2325 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 ATXN7O15265 892 aaPredicted RBP11.43□□□□□ -0.58
SCLT1-202ENST00000439369 EFNA2O43921 213 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 OR10H3O60404 316 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 HPRP00739 348 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 ADAP00813 363 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 CPN1P15169 458 aa11.43□□□□□ -0.58
SCLT1-202ENST00000439369 POU3F2P20265 443 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms