RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 NTN1O95631 604 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 ZNF682O95780 498 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 AGAP20933 346 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 AGFG1P52594 562 aaKnown RBP13.94□□□□□ -0.18
TREX1-201ENST00000433541 DUSP7Q16829 419 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 ELOA3BQ3SY89 546 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 OR2A2Q6IF42 318 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 DEFB107AQ8IZN7 70 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 PGAM4Q8N0Y7 254 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 CNEP1R1Q8N9A8 125 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 ELOA3Q8NG57 546 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 MBD3L2Q8NHZ7 208 aaPredicted RBP13.94□□□□□ -0.18
TREX1-201ENST00000433541 LZICQ8WZA0 190 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 SLC35B4Q969S0 331 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 CPNE4Q96A23 557 aaPredicted RBP13.94□□□□□ -0.18
TREX1-201ENST00000433541 ZHX1-C8orf76Q96EF9 292 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 ZNF559Q9BR84 538 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 TRIM2Q9C040 744 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 EVA1AQ9H8M9 152 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 TMEM27Q9HBJ8 222 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 ADPRHL2Q9NX46 363 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 GMPR2Q9P2T1 348 aaKnown RBP13.94□□□□□ -0.18
TREX1-201ENST00000433541 OSGIN1Q9UJX0 560 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 PACSIN3Q9UKS6 424 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 BAG5Q9UL15 447 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 SH3GLB1Q9Y371 365 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 ZNF175Q9Y473 711 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 CHST2Q9Y4C5 530 aa13.94□□□□□ -0.18
TREX1-201ENST00000433541 SPTAN1Q13813 2472 aaKnown RBP13.93□□□□□ -0.18
TREX1-201ENST00000433541 WIPF3A6NGB9 483 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 EEF1E1-BLOC1S5C9J1V9 151 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 ETV2O00321 342 aaPredicted RBP13.93□□□□□ -0.18
TREX1-201ENST00000433541 CXCR6O00574 342 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 ADAMDEC1O15204 470 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 EEF1E1O43324 174 aaKnown RBP13.93□□□□□ -0.18
TREX1-201ENST00000433541 GCM2O75603 506 aaPredicted RBP13.93□□□□□ -0.18
TREX1-201ENST00000433541 TGM6O95932 706 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 FESP07332 822 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 CALB2P22676 271 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 FKBP2P26885 142 aaKnown RBP13.93□□□□□ -0.18
TREX1-201ENST00000433541 KDELR2P33947 212 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 KCNJ5P48544 419 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 CTBP2P56545 445 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 CSNK2A1P68400 391 aaPredicted RBP13.93□□□□□ -0.18
TREX1-201ENST00000433541 SIRPAP78324 504 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 CTU2Q2VPK5 515 aaKnown RBP13.93□□□□□ -0.18
TREX1-201ENST00000433541 C8orf82Q6P1X6 216 aaPredicted RBP13.93□□□□□ -0.18
TREX1-201ENST00000433541 SEM1Q6ZVN7 128 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 CCDC80Q76M96 950 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 TRPM8Q7Z2W7 1104 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 MAMDC2Q7Z304 686 aaPredicted RBP13.93□□□□□ -0.18
TREX1-201ENST00000433541 COMTD1Q86VU5 262 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 ADGRG3Q86Y34 549 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 ZFP3Q96NJ6 502 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 OR11A1Q9GZK7 315 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 KCNJ16Q9NPI9 418 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 EGFL7Q9UHF1 273 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 DOPEY1Q5JWR5 2465 aa13.93□□□□□ -0.18
TREX1-201ENST00000433541 UTP20O75691 2785 aaKnown RBP13.92□□□□□ -0.18
TREX1-201ENST00000433541 IGHV3-15A0A0B4J1V0 119 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 TMEM72A0PK05 275 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 NKX2-6A6NCS4 301 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 CPSF4LA6NMK7 179 aaKnown RBP13.92□□□□□ -0.18
TREX1-201ENST00000433541 SYT5O00445 386 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 SMNDC1O75940 238 aaKnown RBP eCLIP13.92□□□□□ -0.18
TREX1-201ENST00000433541 TOXO94900 526 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 LGI1O95970 557 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 C8BP07358 591 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 NCK1P16333 377 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 CD247P20963 164 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 CTSSP25774 331 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 DIO1P49895 249 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 OR2B6P58173 313 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 BNIP2Q12982 314 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 CYBRD1Q53TN4 286 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 ALG10BQ5I7T1 473 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 SAMD4BQ5PRF9 694 aaKnown RBP13.92□□□□□ -0.18
TREX1-201ENST00000433541 GTF2IRD2BQ6EKJ0 949 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 FKBP9P1Q75LS8 142 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 ADGRE4PQ86SQ3 457 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 GTF2IRD2Q86UP8 949 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 NAXEQ8NCW5 288 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 GPR32P1Q8NGA4 272 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 ROBO4Q8WZ75 1007 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 C3orf49Q96BT1 292 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 LRRC46Q96FV0 321 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 CDRT15Q96T59 188 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 MCHR1Q99705 422 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 PRR14Q9BWN1 585 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 SRXN1Q9BYN0 137 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 TMEM181Q9P2C4 612 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 ABCD2Q9UBJ2 740 aa13.92□□□□□ -0.18
TREX1-201ENST00000433541 A0A1B0GWA3 101 aa13.91□□□□□ -0.18
TREX1-201ENST00000433541 RCBTB2O95199 551 aa13.91□□□□□ -0.18
TREX1-201ENST00000433541 CLDN1O95832 211 aa13.91□□□□□ -0.18
TREX1-201ENST00000433541 ENPP1P22413 925 aa13.91□□□□□ -0.18
TREX1-201ENST00000433541 HTR2AP28223 471 aa13.91□□□□□ -0.18
TREX1-201ENST00000433541 HTR1EP28566 365 aa13.91□□□□□ -0.18
TREX1-201ENST00000433541 GTF2E2P29084 291 aaKnown RBP13.91□□□□□ -0.18
TREX1-201ENST00000433541 CEACAM8P31997 349 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms