RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 RAB36O95755 333 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 CSTAP01040 98 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 SCG5P05408 212 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 SYPP08247 313 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 IFNA8P32881 189 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 IFNGR2P38484 337 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 SLC1A3P43003 542 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 HTR3AP46098 478 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 RFX2P48378 723 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 SRP9P49458 86 aaKnown RBP7.7□□□□□ -1.18
CD44-208ENST00000428726 IL18Q14116 193 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 KIR2DS3Q14952 304 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 INPP5JQ15735 1006 aaPredicted RBP7.7□□□□□ -1.18
CD44-208ENST00000428726 SLC25A30Q5SVS4 291 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 AGAP6Q5VW22 663 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 KIAA0895LQ68EN5 471 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 TMPRSS9Q7Z410 1059 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 TIGD4Q8IY51 512 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 SAMD14Q8IZD0 417 aaPredicted RBP7.7□□□□□ -1.18
CD44-208ENST00000428726 C19orf47Q8N9M1 422 aaKnown RBP7.7□□□□□ -1.18
CD44-208ENST00000428726 SLC37A3Q8NCC5 494 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 MOSPD2Q8NHP6 518 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 NT5CQ8TCD5 201 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 ACOT11Q8WXI4 607 aaPredicted RBP7.7□□□□□ -1.18
CD44-208ENST00000428726 HSD17B8Q92506 261 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 ZFP3Q96NJ6 502 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 AGAP4Q96P64 663 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 CD180Q99467 661 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 MICU1Q9BPX6 476 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 WACQ9BTA9 647 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 MND1Q9BWT6 205 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 ULBP3Q9BZM4 244 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 DUSP15Q9H1R2 295 aaPredicted RBP7.7□□□□□ -1.18
CD44-208ENST00000428726 PCOLCE2Q9UKZ9 415 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 CFL2Q9Y281 166 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 PEX16Q9Y5Y5 336 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 HYKKA2RU49 373 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 MEIOCA2RUB1 952 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 ISPDA4D126 451 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 FABP12A6NFH5 140 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 DUXAA6NLW8 204 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 G3V3Y1 287 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 SOX1O00570 391 aaPredicted RBP7.7□□□□□ -1.18
CD44-208ENST00000428726 SMAD9O15198 467 aaKnown RBP7.7□□□□□ -1.18
CD44-208ENST00000428726 ZNHIT1O43257 154 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 IL7P13232 177 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 HIST1H1CP16403 213 aaKnown RBP7.7□□□□□ -1.18
CD44-208ENST00000428726 NR0B1P51843 470 aaKnown RBP7.7□□□□□ -1.18
CD44-208ENST00000428726 CDK5Q00535 292 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 ZNF45Q02386 682 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 ZNF79Q15937 498 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 OR2T33Q8NG76 320 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 OR6F1Q8NGZ6 308 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 OR5J2Q8NH18 312 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 NEIL3Q8TAT5 605 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 TMEM163Q8TC26 289 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 ASB15Q8WXK1 588 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 C4orf36Q96KX1 117 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 DGAT2Q96PD7 388 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 DPYSL5Q9BPU6 564 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 C11orf54Q9H0W9 315 aaPredicted RBP7.7□□□□□ -1.18
CD44-208ENST00000428726 CPNE5Q9HCH3 593 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 B3GAT2Q9NPZ5 323 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 NLKQ9UBE8 527 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 MKL2Q9ULH7 1088 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 CBLCQ9ULV8 474 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 SPACA6W5XKT8 324 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 THADAQ6YHU6 1953 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 A0A1W2PPC4 97 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 UNC119BA6NIH7 251 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 SURF4O15260 269 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 PLOD3O60568 738 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 OR2B3O76000 313 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 GLULP15104 373 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 FOLR1P15328 257 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 AQP2P41181 271 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 FOXK1P85037 733 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 PRKCDQ05655 676 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 RSPO4Q2I0M5 234 aaPredicted RBP7.7□□□□□ -1.18
CD44-208ENST00000428726 ZNF181Q2M3W8 571 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 PGGHGQ32M88 737 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 FAM199XQ6PEV8 388 aaPredicted RBP7.7□□□□□ -1.18
CD44-208ENST00000428726 SLC36A4Q6YBV0 504 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 ZNF620Q6ZNG0 422 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 GDPGP1Q6ZNW5 385 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 MED25Q71SY5 747 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 KRT74Q7RTS7 529 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 PRSS45Q7RTY3 260 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 NR2C2APQ86WQ0 139 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 OR2L13Q8N349 312 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 SDR16C5Q8N3Y7 309 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 PROKR2Q8NFJ6 384 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 GNPDA2Q8TDQ7 276 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 SENP5Q96HI0 755 aaPredicted RBP7.7□□□□□ -1.18
CD44-208ENST00000428726 TXNDC15Q96J42 360 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 ARHGDIGQ99819 225 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 NXF5Q9H1B4 397 aaKnown RBP7.7□□□□□ -1.18
CD44-208ENST00000428726 FOLH1BQ9HBA9 442 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 ASB6Q9NWX5 421 aa7.7□□□□□ -1.18
CD44-208ENST00000428726 CTSFQ9UBX1 484 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms