RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 TXNL4AP83876 142 aaKnown RBP16.9■□□□□ 0.3
AL954642.1-201ENST00000428088 CAPRIN1Q14444 709 aaKnown RBP16.9■□□□□ 0.3
AL954642.1-201ENST00000428088 Q6ZT83 130 aa16.9■□□□□ 0.3
AL954642.1-201ENST00000428088 BHLHA15Q7RTS1 189 aaPredicted RBP16.9■□□□□ 0.3
AL954642.1-201ENST00000428088 GALNT5Q7Z7M9 940 aa16.9■□□□□ 0.3
AL954642.1-201ENST00000428088 MTDHQ86UE4 582 aaKnown RBP16.9■□□□□ 0.3
AL954642.1-201ENST00000428088 PIWIL2Q8TC59 973 aaKnown RBP16.9■□□□□ 0.3
AL954642.1-201ENST00000428088 WDR60Q8WVS4 1066 aa16.9■□□□□ 0.3
AL954642.1-201ENST00000428088 HSD17B8Q92506 261 aa16.9■□□□□ 0.3
AL954642.1-201ENST00000428088 AKAP1Q92667 903 aaKnown RBP eCLIP16.9■□□□□ 0.3
AL954642.1-201ENST00000428088 POM121Q96HA1 1249 aa16.9■□□□□ 0.3
AL954642.1-201ENST00000428088 CADP27708 2225 aa16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 HS3ST1O14792 307 aa16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 PMS2P2O95744 297 aa16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 RPS4Y1P22090 263 aaKnown RBP16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 ADSLP30566 484 aaPredicted RBP16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 MAPK11Q15759 364 aa16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 GSTA3Q16772 222 aa16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 ABLIM2Q6H8Q1 611 aa16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 Q71RC1 249 aaPredicted RBP16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 YTHDF3Q7Z739 585 aaKnown RBP16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 ATG4DQ86TL0 474 aaPredicted RBP16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 BIVMQ86UB2 503 aa16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 CMIPQ8IY22 773 aa16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 ZNF100Q8IYN0 542 aa16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 OR9I1Q8NGQ6 314 aa16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 Q96MF0 132 aa16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 ZIM2Q9NZV7 527 aa16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 HDGFL3Q9Y3E1 203 aa16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 NAV3Q8IVL0 2385 aa16.89■□□□□ 0.29
AL954642.1-201ENST00000428088 TMED7-TICAM2A0A0A6YYA0 188 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 TMEM72A0PK05 275 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 UBDO15205 165 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 CLOCKO15516 846 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 ANP32DO95626 131 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 ETFAP13804 333 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 HOXB4P17483 251 aaPredicted RBP16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 CRATP43155 626 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 PTH2RP49190 550 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 MVDP53602 400 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 OR2B6P58173 313 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 STK11Q15831 433 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 GTDC1Q4AE62 458 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 NCMAPQ5T1S8 102 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 MRPL2Q5T653 305 aaKnown RBP16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 PRSS57Q6UWY2 283 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 CCDC103Q8IW40 242 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 ZNF611Q8N823 705 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 TMEM171Q8WVE6 324 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 IGFBPL1Q8WX77 278 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 ZHX1-C8orf76Q96EF9 292 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 TPT1P8Q9HAU6 139 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 SDR39U1Q9NRG7 319 aaPredicted RBP16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 RLIMQ9NVW2 624 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 EMC3Q9P0I2 261 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 OSGIN1Q9UJX0 560 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 TMED7Q9Y3B3 224 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 RNF115Q9Y4L5 304 aa16.88■□□□□ 0.29
AL954642.1-201ENST00000428088 IGKV3D-15A0A087WSY6 115 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 CFAP73A6NFT4 308 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 ZNF716A6NP11 495 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 KLF11O14901 512 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 RAMP1O60894 148 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 IGHV3-9P01782 118 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 DBIP07108 87 aaKnown RBP16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 CD3EP07766 207 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 IGHV1-2P23083 117 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 FKBP2P26885 142 aaKnown RBP16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 TACR3P29371 465 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 HTR3AP46098 478 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 CLK1P49759 484 aaKnown RBP16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 POLR2HP52434 150 aaKnown RBP16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 POLR2JP52435 117 aaKnown RBP16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 EPS8Q12929 822 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 GNA13Q14344 377 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 PDK3Q15120 406 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 VRK2Q86Y07 508 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 PEX5LQ8IYB4 626 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 CIARTQ8N365 385 aaPredicted RBP16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 LILRB1Q8NHL6 650 aaPredicted RBP16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 PMM1Q92871 262 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 VPS33AQ96AX1 596 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 AURKBQ96GD4 344 aaPredicted RBP16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 USB1Q9BQ65 265 aaKnown RBP16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 POTEKPQ9BYX7 375 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 GSX2Q9BZM3 304 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 ESRP2Q9H6T0 727 aaKnown RBP16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 RMND5AQ9H871 391 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 NGBQ9NPG2 151 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 TMEM181Q9P2C4 612 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 P2RX2Q9UBL9 471 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 NOSIPQ9Y314 301 aaKnown RBP16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 USH1CQ9Y6N9 552 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 ZANQ9Y493 2812 aa16.87■□□□□ 0.29
AL954642.1-201ENST00000428088 BCHEP06276 602 aa16.86■□□□□ 0.29
AL954642.1-201ENST00000428088 GKN3PP0CG01 181 aa16.86■□□□□ 0.29
AL954642.1-201ENST00000428088 NTF4P34130 210 aa16.86■□□□□ 0.29
AL954642.1-201ENST00000428088 SLC1A3P43003 542 aa16.86■□□□□ 0.29
AL954642.1-201ENST00000428088 C6orf10Q5SRN2 563 aa16.86■□□□□ 0.29
AL954642.1-201ENST00000428088 SEZ6L2Q6UXD5 910 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms