RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 Q6ZPB1 254 aaPredicted RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 FAM83HQ6ZRV2 1179 aaPredicted RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 RANBP3LQ86VV4 465 aaPredicted RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 TGIF2LXQ8IUE1 241 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 BAP18Q8IXM2 172 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ACBD7Q8N6N7 88 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 NPWQ8N729 165 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 UBAC2Q8NBM4 344 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 REPS2Q8NFH8 660 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 OR2AP1Q8NGE2 309 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 OR10R2Q8NGX6 335 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 OR52J3Q8NH60 311 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 GOT1L1Q8NHS2 421 aaPredicted RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 HUS1BQ8NHY5 278 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 SLC2A12Q8TD20 617 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 GPBAR1Q8TDU6 330 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 TRAPPC12Q8WVT3 735 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 CLEC4DQ8WXI8 215 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 GAL3ST3Q96A11 431 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 MTFMTQ96DP5 389 aaKnown RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 LRIG1Q96JA1 1093 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 MEGF10Q96KG7 1140 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 KLHL5Q96PQ7 755 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 SULT4A1Q9BR01 284 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ATG5Q9H1Y0 275 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 OPN3Q9H1Y3 402 aaPredicted RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 CHST8Q9H2A9 424 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 SLC32A1Q9H598 525 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 CWH43Q9H720 699 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 BRF2Q9HAW0 419 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 TMEM27Q9HBJ8 222 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 CRLF2Q9HC73 371 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 EXOSC3Q9NQT5 275 aaKnown RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 SIRT7Q9NRC8 400 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 MARCH5Q9NX47 278 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 LPAR3Q9UBY5 353 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZNF225Q9UK10 706 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 ATXN7L1Q9ULK2 861 aaPredicted RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 TNFSF18Q9UNG2 199 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 KCTD3Q9Y597 815 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 NME7Q9Y5B8 376 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 COL11A2P13942 1736 aaPredicted RBP5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 DENND4AQ7Z401 1863 aa5.22□□□□□ -1.57
VTI1BP4-201ENST00000427516 MIA3Q5JRA6 1907 aa5.21□□□□□ -1.57
VTI1BP4-201ENST00000427516 CCDC163A0A0D9SF12 145 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 LOC100996750A0A140TA64 210 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 A0A1W2PN81 502 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 A0A1W2PPC1 479 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 TVP23AA6NH52 213 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 LRRC14BA6NHZ5 514 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 SLC22A31A6NKX4 558 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 H7C417 338 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 DVL1O14640 695 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 TOX3O15405 576 aaPredicted RBP5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 EMC8O43402 210 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 LDB2O43679 373 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 PLPP2O43688 288 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 KDELR3O43731 214 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 BNIP3LO60238 219 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 PCDH7O60245 1069 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 ICOSLGO75144 302 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 MED6O75586 246 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 BEST1O76090 585 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 DDNO94850 711 aaPredicted RBP5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 FARS2O95363 451 aaKnown RBP5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 CPSF4O95639 269 aaKnown RBP5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 GUCA1CO95843 209 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 GCGP01275 180 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 GASTP01350 101 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 RLN1P04808 185 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 RPLP1P05386 114 aaKnown RBP5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 C8GP07360 202 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 ITGA5P08648 1049 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 UCHL1P09936 223 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 AKAIN1P0CW23 69 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 ARAFP10398 606 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 CD79AP11912 226 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 ETFAP13804 333 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 PAX1P15863 534 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 NQO2P16083 231 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 CBR1P16152 277 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 EPHA1P21709 976 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 DRD5P21918 477 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 NDUFS1P28331 727 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 PRDX3P30048 256 aaKnown RBP5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 CHRNA7P36544 502 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 KIR3DL2P43630 455 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 CHRNA4P43681 627 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 GPR15P49685 360 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 AGTR2P50052 363 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 RABGGTBP53611 331 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 SOX10P56693 466 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 YBEYP58557 167 aaPredicted RBP5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 TAS2R31P59538 309 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 OR2B8PP59922 312 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 RAP1BP61224 184 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 RANP62826 216 aaKnown RBP5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 DGCR2P98153 550 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 CDK5Q00535 292 aa5.21□□□□□ -1.58
VTI1BP4-201ENST00000427516 GAB1Q13480 694 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms