RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 SPAG4Q9NPE6 437 aa6.68□□□□□ -1.34
LINC01049-201ENST00000426840 ADA2Q9NZK5 511 aa6.68□□□□□ -1.34
LINC01049-201ENST00000426840 ACAD8Q9UKU7 415 aa6.68□□□□□ -1.34
LINC01049-201ENST00000426840 HIVEP3Q5T1R4 2406 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 TRGV8A0A0C4DH27 118 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 AHRRA9YTQ3 701 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 H0YC42 278 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 SYT5O00445 386 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 CXCR6O00574 342 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 PRRG2O14669 202 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 OPN1LWP04000 364 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 PEPDP12955 493 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 GP1BBP13224 206 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 HSD17B1P14061 328 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 NCK1P16333 377 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 ZNF708P17019 499 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 ZNF17P17021 662 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 GGT1P19440 569 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 MSX2P35548 267 aaPredicted RBP6.67□□□□□ -1.34
LINC01049-201ENST00000426840 EIF1P41567 113 aaKnown RBP6.67□□□□□ -1.34
LINC01049-201ENST00000426840 CCR4P51679 360 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 TPD52P55327 224 aaPredicted RBP6.67□□□□□ -1.34
LINC01049-201ENST00000426840 CLDN18P56856 261 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 CLDN20P56880 219 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 SELENOWP63302 87 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 MXRA7P84157 204 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 HOXC5Q00444 222 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 NRF1Q16656 503 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 SPATS1Q496A3 300 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 C1QL3Q5VWW1 255 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 RAET1LQ5VY80 246 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 GLYATQ6IB77 296 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 RTL6Q6ICC9 239 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 ZNF585AQ6P3V2 769 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 LRFN4Q6PJG9 635 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 ENPP6Q6UWR7 440 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 PLEKHM3Q6ZWE6 761 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 ADGRE4PQ86SQ3 457 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 ADGRG3Q86Y34 549 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 RBM45Q8IUH3 476 aaKnown RBP6.67□□□□□ -1.34
LINC01049-201ENST00000426840 PM20D2Q8IYS1 436 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 ULK2Q8IYT8 1036 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 TMCO5AQ8N6Q1 288 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 FAM156AQ8NDB6 213 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 BHLHE22Q8NFJ8 381 aaPredicted RBP6.67□□□□□ -1.34
LINC01049-201ENST00000426840 ZNF563Q8TA94 476 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 TMEM234Q8WY98 164 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 ST8SIA1Q92185 356 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 MRGPRX4Q96LA9 322 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 DMRTA2Q96SC8 542 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 ARHGDIGQ99819 225 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 KCTD14Q9BQ13 255 aaPredicted RBP6.67□□□□□ -1.34
LINC01049-201ENST00000426840 ARMC7Q9H6L4 198 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 EVA1AQ9H8M9 152 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 CTPS2Q9NRF8 586 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 NDE1Q9NXR1 346 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 TINAGQ9UJW2 476 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 AP4B1Q9Y6B7 739 aa6.67□□□□□ -1.34
LINC01049-201ENST00000426840 PCNX1Q96RV3 2341 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 A0A0J9YW62 118 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 A0A1B0GUH1 482 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 CLEC18AA5D8T8 446 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 KDM4EB2RXH2 506 aaPredicted RBP6.66□□□□□ -1.34
LINC01049-201ENST00000426840 FAM47E-STBD1D6RA91 191 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 E9PLN8 166 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 H3BML4 177 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 CCL21O00585 134 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 ADAMDEC1O15204 470 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 GSTA4O15217 222 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 LRRTM2O43300 516 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 WDR1O75083 606 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 SEMA7AO75326 666 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 IFNA14P01570 189 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 FESP07332 822 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 HOXD4P09016 255 aaPredicted RBP6.66□□□□□ -1.34
LINC01049-201ENST00000426840 GABRA1P14867 456 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 FOSL1P15407 271 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 TCN1P20061 433 aaPredicted RBP6.66□□□□□ -1.34
LINC01049-201ENST00000426840 POU3F2P20265 443 aaPredicted RBP6.66□□□□□ -1.34
LINC01049-201ENST00000426840 ACVR2AP27037 513 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 HTR2AP28223 471 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 SHC1P29353 583 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 TACR3P29371 465 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 GCKP35557 465 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 APOBEC1P41238 236 aaKnown RBP6.66□□□□□ -1.34
LINC01049-201ENST00000426840 SLC1A3P43003 542 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 SRYQ05066 204 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 MERTKQ12866 999 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 NPTX1Q15818 432 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 CTU2Q2VPK5 515 aaKnown RBP6.66□□□□□ -1.34
LINC01049-201ENST00000426840 CYBRD1Q53TN4 286 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 SAMD4BQ5PRF9 694 aaKnown RBP6.66□□□□□ -1.34
LINC01049-201ENST00000426840 PGM2L1Q6PCE3 622 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 CLEC18BQ6UXF7 455 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 C3P1Q6ZMU1 363 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 SEM1Q6ZVN7 128 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 CBLL1Q75N03 491 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 GRINAQ7Z429 371 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 GGNQ86UU5 652 aa6.66□□□□□ -1.34
LINC01049-201ENST00000426840 TSPYL5Q86VY4 417 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms