RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.3□□□□□ -0.44
HDAC6-206ENST00000426196 ANKRD26P1Q6NSI1 321 aa12.3□□□□□ -0.44
HDAC6-206ENST00000426196 CDC73Q6P1J9 531 aa12.3□□□□□ -0.44
HDAC6-206ENST00000426196 FAHD2BQ6P2I3 314 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-206ENST00000426196 ZCCHC24Q8N2G6 241 aaKnown RBP12.3□□□□□ -0.44
HDAC6-206ENST00000426196 OR4F15Q8NGB8 312 aa12.3□□□□□ -0.44
HDAC6-206ENST00000426196 TMEM234Q8WY98 164 aa12.3□□□□□ -0.44
HDAC6-206ENST00000426196 FAHD2AQ96GK7 314 aa12.3□□□□□ -0.44
HDAC6-206ENST00000426196 ZNF764Q96H86 408 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-206ENST00000426196 KCNA7Q96RP8 456 aa12.3□□□□□ -0.44
HDAC6-206ENST00000426196 CDC42EP4Q9H3Q1 356 aaKnown RBP12.3□□□□□ -0.44
HDAC6-206ENST00000426196 SLC7A10Q9NS82 523 aa12.3□□□□□ -0.44
HDAC6-206ENST00000426196 DTNAQ9Y4J8 743 aa12.3□□□□□ -0.44
HDAC6-206ENST00000426196 BCL10O95999 233 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 PNPP00491 289 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 SBK3P0C264 359 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 CDH2P19022 906 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-206ENST00000426196 SESN3P58005 492 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 NAAAQ02083 359 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 GUCY2DQ02846 1103 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 LCP2Q13094 533 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 LASP1Q14847 261 aaKnown RBP12.29□□□□□ -0.44
HDAC6-206ENST00000426196 HIKESHIQ53FT3 197 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 EXOSC6Q5RKV6 272 aaKnown RBP12.29□□□□□ -0.44
HDAC6-206ENST00000426196 DCST2Q5T1A1 773 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 TSPO2Q5TGU0 170 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 NOXRED1Q6NXP6 359 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 BPIFB2Q8N4F0 458 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 CLDND2Q8NHS1 167 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 FBXO25Q8TCJ0 367 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 PPCDCQ96CD2 204 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 EGLN2Q96KS0 407 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 TMEM237Q96Q45 408 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 THUMPD3Q9BV44 507 aaKnown RBP12.29□□□□□ -0.44
HDAC6-206ENST00000426196 PIGUQ9H490 435 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 NARFLQ9H6Q4 476 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 ACSS1Q9NUB1 689 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-206ENST00000426196 HDGFL3Q9Y3E1 203 aa12.29□□□□□ -0.44
HDAC6-206ENST00000426196 TRAV20A0A0B4J274 112 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 SH3PXD2BA1X283 911 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 ESPNB1AK53 854 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 LYNX1G3V0Z9 82 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 CYP7B1O75881 506 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 HMGN2P05204 90 aaKnown RBP12.28□□□□□ -0.44
HDAC6-206ENST00000426196 INHBAP08476 426 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 LYNX1P0DP58 116 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 HKR1P10072 659 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 SAGP10523 405 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-206ENST00000426196 NPR2P20594 1047 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 GPR6P46095 362 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-206ENST00000426196 UBE2NP61088 152 aaKnown RBP12.28□□□□□ -0.44
HDAC6-206ENST00000426196 ZNF385BQ569K4 471 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 SPATA21Q7Z572 469 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 ABHD12BQ7Z5M8 362 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-206ENST00000426196 CCDC103Q8IW40 242 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 NUP37Q8NFH4 326 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 FAM120BQ96EK7 910 aaKnown RBP12.28□□□□□ -0.44
HDAC6-206ENST00000426196 ANKRD27Q96NW4 1050 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 DOK1Q99704 481 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 SLC6A7Q99884 636 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 ZNF442Q9H7R0 627 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 ZCCHC3Q9NUD5 404 aaKnown RBP12.28□□□□□ -0.44
HDAC6-206ENST00000426196 DDX28Q9NUL7 540 aaKnown RBP12.28□□□□□ -0.44
HDAC6-206ENST00000426196 SH3BP4Q9P0V3 963 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 CHRNA9Q9UGM1 479 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 FLVCR1Q9Y5Y0 555 aa12.28□□□□□ -0.44
HDAC6-206ENST00000426196 LOC105371242A0A075B767 164 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 NPIPB9F8W1W9 429 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 ANKRD28O15084 1053 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 RSL1D1O76021 490 aaKnown RBP12.27□□□□□ -0.45
HDAC6-206ENST00000426196 KRT16P08779 473 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 GAAP10253 952 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 PHBP35232 272 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 FRKP42685 505 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-206ENST00000426196 OR2B6P58173 313 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 UBA52P62987 128 aaKnown RBP12.27□□□□□ -0.45
HDAC6-206ENST00000426196 SKP2Q13309 424 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 C3orf36Q3SXR2 165 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 ANKRD16Q6P6B7 361 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 TMEM151AQ8N4L1 468 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 ZDHHC22Q8N966 263 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 POMGNT2Q8NAT1 580 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 ADAMTS15Q8TE58 950 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 CKAP2Q8WWK9 683 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 DNAJA3Q96EY1 480 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 ARL5BQ96KC2 179 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 LAT2Q9GZY6 243 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 REEP4Q9H6H4 257 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 MOV10Q9HCE1 1003 aaKnown RBP12.27□□□□□ -0.45
HDAC6-206ENST00000426196 ESM1Q9NQ30 184 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 RRAGDQ9NQL2 400 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-206ENST00000426196 ACER3Q9NUN7 267 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 UTP11Q9Y3A2 253 aaKnown RBP12.27□□□□□ -0.45
HDAC6-206ENST00000426196 SAR1BQ9Y6B6 198 aa12.27□□□□□ -0.45
HDAC6-206ENST00000426196 ZSCAN12O43309 604 aa12.26□□□□□ -0.45
HDAC6-206ENST00000426196 RAD51CO43502 376 aa12.26□□□□□ -0.45
HDAC6-206ENST00000426196 AKAP10O43572 662 aa12.26□□□□□ -0.45
HDAC6-206ENST00000426196 EIF1BO60739 113 aaKnown RBP12.26□□□□□ -0.45
HDAC6-206ENST00000426196 DNAJA2O60884 412 aa12.26□□□□□ -0.45
HDAC6-206ENST00000426196 KRT33AO76009 404 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms