RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 FOXN2P32314 431 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 TALDO1P37837 337 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 HSPA13P48723 471 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 NPY2RP49146 381 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 ETV1P50549 477 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 GPX6P59796 221 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 PTENP60484 403 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 STX1BP61266 288 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 VBP1P61758 197 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 FKBP1BP68106 108 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 MRPS15P82914 257 aaKnown RBP2.57□□□□□ -2
LINC01040-201ENST00000425048 RAD51Q06609 339 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 MFGE8Q08431 387 aaPredicted RBP2.57□□□□□ -2
LINC01040-201ENST00000425048 LRRC74AQ0VAA2 488 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 STK38Q15208 465 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 TOMM20Q15388 145 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 SGCAQ16586 387 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 C12orf60Q5U649 245 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 FAM91A1Q658Y4 838 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 APOOLQ6UXV4 268 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 MIER3Q7Z3K6 550 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 SLFN11Q7Z7L1 901 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 CPNE9Q8IYJ1 553 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 LYPD1Q8N2G4 141 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 MINDY2Q8NBR6 621 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 ATAD1Q8NBU5 361 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 KCTD6Q8NC69 237 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 SCFD1Q8WVM8 642 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 C10orf82Q8WW14 230 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 RIT1Q92963 219 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 TMEM80Q96HE8 168 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 PCED1BQ96HM7 432 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 MS4A14Q96JA4 679 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 TSNARE1Q96NA8 513 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 SERPINB12Q96P63 405 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 DOK1Q99704 481 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 TSG101Q99816 390 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 SELENOSQ9BQE4 189 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 FERMT1Q9BQL6 677 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 LHX5Q9H2C1 402 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 AZI2Q9H6S1 392 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 MINDY3Q9H8M7 445 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 LMAN1LQ9HAT1 526 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 PLEK2Q9NYT0 353 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 EMC3Q9P0I2 261 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 MBD2Q9UBB5 411 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 RNF14Q9UBS8 474 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 NUP50Q9UKX7 468 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 EIF3LQ9Y262 564 aaKnown RBP2.57□□□□□ -2
LINC01040-201ENST00000425048 ACOT9Q9Y305 439 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 FLVCR1Q9Y5Y0 555 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 ABCB11O95342 1321 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 NRCAMQ92823 1304 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 CD163L1Q9NR16 1453 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 NEXMIFQ5QGS0 1516 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 ZFYVE16Q7Z3T8 1539 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 FRMPD1Q5SYB0 1578 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 SAMD9LQ8IVG5 1584 aa2.57□□□□□ -2
LINC01040-201ENST00000425048 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 CHD5Q8TDI0 1954 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 A0A0G2JMP0 313 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 TTC26A0AVF1 554 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 ESYT2A0FGR8 921 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 MAGEB16A2A368 324 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 ZNF98A6NK75 572 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 TMX2-CTNND1H3BSU7 103 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 LAD1O00515 517 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 KPNA4O00629 521 aaPredicted RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 TOR1AO14656 332 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 MAPK13O15264 365 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 SNAI2O43623 268 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 GATCO43716 136 aaKnown RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 UGT1A9O60656 530 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 CDH16O75309 829 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 FKBP6O75344 327 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 NDUFS6O75380 124 aaKnown RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 ANXA9O76027 345 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 GAS8O95995 478 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 SLC4A1P02730 911 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 PGK2P07205 417 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 CAPN1P07384 714 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 DBTP11182 482 aaKnown RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 CCDC130P13994 396 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 UGT1A3P35503 534 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 UGT1A5P35504 534 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 FDFT1P37268 417 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 SYKP43405 635 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 MTIF2P46199 727 aaKnown RBP2.56□□□□□ -2
LINC01040-201ENST00000425048 SLC7A2P52569 658 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 ARFIP1P53367 373 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 NAGLUP54802 743 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 AQP4P55087 323 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 ACTR3P61158 418 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 ZNF45Q02386 682 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 UBXN1Q04323 297 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 IDI1Q13907 227 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 HERPUD1Q15011 391 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 KRT31Q15323 416 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 MAPK6Q16659 721 aa2.56□□□□□ -2
LINC01040-201ENST00000425048 TRIM16LQ309B1 348 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms