RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ZNF322Q6U7Q0 402 aaPredicted RBP10.96□□□□□ -0.66
PTPRN-204ENST00000423636 TMEM91Q6ZNR0 172 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 KLHL36Q8N4N3 616 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 RPRD1BQ9NQG5 326 aaKnown RBP10.96□□□□□ -0.66
PTPRN-204ENST00000423636 GNG8Q9UK08 70 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 SF3B6Q9Y3B4 125 aaKnown RBP10.96□□□□□ -0.66
PTPRN-204ENST00000423636 HS3ST3A1Q9Y663 406 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 FREM3P0C091 2139 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 KIR2DS5A0A0G2JLQ3 304 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 A0A0G2JNG1 304 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 FAM221BA6H8Z2 402 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 KIR2DS3K7RE56 304 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 BHLHE40O14503 412 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 ASNA1O43681 348 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 CPEP16870 476 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 STAT5AP42229 794 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 RPS5P46782 204 aaKnown RBP10.96□□□□□ -0.66
PTPRN-204ENST00000423636 COPZ1P61923 177 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 CFHR1Q03591 330 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 KIR2DS5Q14953 304 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 NSDHLQ15738 373 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 NIPAL3Q6P499 406 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 CEACAM19Q7Z692 300 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 MARCH3Q86UD3 253 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 ACBD7Q8N6N7 88 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 ZNF433Q8N7K0 673 aaPredicted RBP10.96□□□□□ -0.66
PTPRN-204ENST00000423636 OR4D9Q8NGE8 314 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 ZNF563Q8TA94 476 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 SMPDL3BQ92485 455 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 DPYSL5Q9BPU6 564 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 TTYH2Q9BSA4 534 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 CTSFQ9UBX1 484 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 ZNF223Q9UK11 482 aaPredicted RBP10.96□□□□□ -0.66
PTPRN-204ENST00000423636 MKL2Q9ULH7 1088 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 N6AMT1Q9Y5N5 214 aa10.96□□□□□ -0.66
PTPRN-204ENST00000423636 FER1L5A0AVI2 2057 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 PSKH1P11801 424 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 PIPP12273 146 aaPredicted RBP10.95□□□□□ -0.66
PTPRN-204ENST00000423636 GLULP15104 373 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 SOX2P48431 317 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 LIMK1P53667 647 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 CD83Q01151 205 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 NDUFA9Q16795 377 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 KIF26BQ2KJY2 2108 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 PLK5Q496M5 336 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 BICRALQ6AI39 1079 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 PHF3Q92576 2039 aaKnown RBP10.95□□□□□ -0.66
PTPRN-204ENST00000423636 SLC25A46Q96AG3 418 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 ZFP3Q96NJ6 502 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 TIMP4Q99727 224 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 PSD2Q9BQI7 771 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 C11orf54Q9H0W9 315 aaPredicted RBP10.95□□□□□ -0.66
PTPRN-204ENST00000423636 AKIRIN1Q9H9L7 192 aaPredicted RBP10.95□□□□□ -0.66
PTPRN-204ENST00000423636 MCCC2Q9HCC0 563 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 B3GNT3Q9Y2A9 372 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 LANCL1O43813 399 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 SLC35E2P0CK97 266 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 RFX2P48378 723 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 OR2B6P58173 313 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 DMRTC1Q5HYR2 192 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 ZNF57Q68EA5 555 aaPredicted RBP10.95□□□□□ -0.66
PTPRN-204ENST00000423636 QSOX2Q6ZRP7 698 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 GPR119Q8TDV5 335 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 VSTM2LQ96N03 204 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 CTRCQ99895 268 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 ULBP3Q9BZM4 244 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 SLC7A5P2Q9GIP4 190 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 LYRM4Q9HD34 91 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 NUFIP1Q9UHK0 495 aaKnown RBP10.95□□□□□ -0.66
PTPRN-204ENST00000423636 AK6Q9Y3D8 172 aaKnown RBP10.95□□□□□ -0.66
PTPRN-204ENST00000423636 CLDN16Q9Y5I7 305 aa10.95□□□□□ -0.66
PTPRN-204ENST00000423636 A0A0G2JMP0 313 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 A0A0X1KG70 313 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 RIIAD1A6NNX1 92 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 KDM4EB2RXH2 506 aaPredicted RBP10.94□□□□□ -0.66
PTPRN-204ENST00000423636 DCTN6O00399 190 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 CLDN4O14493 209 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 HCRTR2O43614 444 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 CCNKO75909 580 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 LYPD3O95274 346 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 PDGFBP01127 241 aaPredicted RBP10.94□□□□□ -0.66
PTPRN-204ENST00000423636 TFP02787 698 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 CSF3P09919 207 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 TSFMP43897 325 aaKnown RBP10.94□□□□□ -0.66
PTPRN-204ENST00000423636 CD97P48960 835 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 TDGQ13569 410 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 MEPCEQ7L2J0 689 aaKnown RBP10.94□□□□□ -0.66
PTPRN-204ENST00000423636 KRT74Q7RTS7 529 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 PRSS45Q7RTY3 260 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 TMPRSS9Q7Z410 1059 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 OR4M2Q8NGB6 313 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 OR5W2Q8NH69 310 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 FYTTD1Q96QD9 318 aaKnown RBP10.94□□□□□ -0.66
PTPRN-204ENST00000423636 ZNF649Q9BS31 505 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 DUSP15Q9H1R2 295 aaPredicted RBP10.94□□□□□ -0.66
PTPRN-204ENST00000423636 UBE2ZQ9H832 354 aaPredicted RBP10.94□□□□□ -0.66
PTPRN-204ENST00000423636 Q9N2J8 555 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 DUSP22Q9NRW4 184 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 ACOXLQ9NUZ1 547 aa10.94□□□□□ -0.66
PTPRN-204ENST00000423636 NLKQ9UBE8 527 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms