RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 SFTPDP35247 375 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 MAP2K6P52564 334 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 CDH12P55289 794 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 TAS2R41P59536 307 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 MRPL49Q13405 166 aaKnown RBP15.3■□□□□ 0.04
COL7A1-202ENST00000422991 PIN1Q13526 163 aaPredicted RBP15.3■□□□□ 0.04
COL7A1-202ENST00000422991 IQCCQ4KMZ1 466 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 EMC4Q5J8M3 183 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 WLSQ5T9L3 541 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 CD163Q86VB7 1156 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 SPATA24Q86W54 205 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 ADGRG5Q8IZF4 528 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 OR5M9Q8NGP3 310 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 SLC38A4Q969I6 547 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 SLC41A3Q96GZ6 507 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 KLHL15Q96M94 604 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 RAB3IPQ96QF0 476 aaPredicted RBP15.3■□□□□ 0.04
COL7A1-202ENST00000422991 SEPHS2Q99611 448 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 KIAA1549Q9HCM3 1950 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 PNPLA3Q9NST1 481 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 SELENONQ9NZV5 590 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 NDUFAF4Q9P032 175 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 STOML1Q9UBI4 398 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 CAMK2AQ9UQM7 478 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 ASH1LQ9NR48 2969 aaKnown RBP15.29■□□□□ 0.04
COL7A1-202ENST00000422991 DHRS12A0PJE2 317 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 ELOA3DA6NLF2 546 aaPredicted RBP15.29■□□□□ 0.04
COL7A1-202ENST00000422991 GJE1A6NN92 205 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 H0YC42 278 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 J3KTA2 159 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 FFAR1O14842 300 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 SEC14L5O43304 696 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 ZNF208O43345 1280 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 PRSS23O95084 383 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 OPN1LWP04000 364 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 FABP3P05413 133 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 GPIP06744 558 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 TPOP07202 933 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 NQO1P15559 274 aaKnown RBP15.29■□□□□ 0.04
COL7A1-202ENST00000422991 CCNA2P20248 432 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 MAGEA2P43356 314 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 YAP1P46937 504 aaKnown RBP15.29■□□□□ 0.04
COL7A1-202ENST00000422991 SUCLG1P53597 346 aaKnown RBP15.29■□□□□ 0.04
COL7A1-202ENST00000422991 TPD52P55327 224 aaPredicted RBP15.29■□□□□ 0.04
COL7A1-202ENST00000422991 CLDN15P56746 228 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 CTU2Q2VPK5 515 aaKnown RBP15.29■□□□□ 0.04
COL7A1-202ENST00000422991 ELOA3BQ3SY89 546 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 FAM98BQ52LJ0 330 aaKnown RBP15.29■□□□□ 0.04
COL7A1-202ENST00000422991 SYT14P1Q58G82 188 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 GDF7Q7Z4P5 450 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 CYP4Z1Q86W10 505 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 PM20D2Q8IYS1 436 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 UBQLNLQ8IYU4 475 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 OFCC1Q8IZS5 231 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 MEIOBQ8N635 442 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 ATP6V1C2Q8NEY4 427 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 ELOA3Q8NG57 546 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 ADGRG7Q96K78 797 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 ZNF300Q96RE9 604 aaPredicted RBP15.29■□□□□ 0.04
COL7A1-202ENST00000422991 OR11A1Q9GZK7 315 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 IL1RAPQ9NPH3 570 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 RIMS3Q9UJD0 308 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 SLC7A7Q9UM01 511 aa15.29■□□□□ 0.04
COL7A1-202ENST00000422991 A0A087WUJ7 227 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 A0A0J9YW62 118 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 ERICH4A6NGS2 130 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 H0Y3Z8 333 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 ADAMDEC1O15204 470 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 THRBP10828 461 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 UMPSP11172 480 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 ITGA2P17301 1181 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 RHCEP18577 417 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 FKBP2P26885 142 aaKnown RBP15.28■□□□□ 0.04
COL7A1-202ENST00000422991 ERFP50548 548 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 SRYQ05066 204 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 CHRNB3Q05901 458 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 CCNIQ14094 377 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 TMEM176BQ3YBM2 270 aaPredicted RBP15.28■□□□□ 0.04
COL7A1-202ENST00000422991 GXYLT1Q4G148 440 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 LINC00114Q6XXX2 140 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 WDR88Q6ZMY6 472 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 ESPNLQ6ZVH7 1005 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 PIWIL3Q7Z3Z3 882 aaKnown RBP15.28■□□□□ 0.04
COL7A1-202ENST00000422991 ATCAYQ86WG3 371 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 ZDHHC21Q8IVQ6 265 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 CANT1Q8WVQ1 401 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 DDIT4LQ96D03 193 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 MPP4Q96JB8 637 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 PRSS27Q9BQR3 290 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 COQ10BQ9H8M1 238 aa15.28■□□□□ 0.04
COL7A1-202ENST00000422991 IGKV1D-42A0A075B6H8 117 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 ZC3H12DA2A288 527 aaKnown RBP15.27■□□□□ 0.04
COL7A1-202ENST00000422991 FIGNL2A6NMB9 653 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 A8MVM7 634 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 EIF1AYO14602 144 aaKnown RBP15.27■□□□□ 0.04
COL7A1-202ENST00000422991 PRRG2O14669 202 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 TNFSF11O14788 317 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 NPIPB7O75200 414 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 DIRAS1O95057 198 aa15.27■□□□□ 0.04
COL7A1-202ENST00000422991 RAP2AP10114 183 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms