RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 HEPHL1Q6MZM0 1159 aa11.74□□□□□ -0.53
CTCFL-204ENST00000422869 TMUB2Q71RG4 321 aa11.74□□□□□ -0.53
CTCFL-204ENST00000422869 OVCH1Q7RTY7 1134 aa11.74□□□□□ -0.53
CTCFL-204ENST00000422869 HSD17B13Q7Z5P4 300 aaPredicted RBP11.74□□□□□ -0.53
CTCFL-204ENST00000422869 PITHD1Q9GZP4 211 aaPredicted RBP11.74□□□□□ -0.53
CTCFL-204ENST00000422869 EXOSC3Q9NQT5 275 aaKnown RBP11.74□□□□□ -0.53
CTCFL-204ENST00000422869 CLDND1Q9NY35 253 aa11.74□□□□□ -0.53
CTCFL-204ENST00000422869 FAM86C2PA6NEL3 165 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 KPNA3O00505 521 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 CREBL2O60519 120 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 HIST1H2ABP04908 130 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 HOXB3P14651 431 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 HTR2AP28223 471 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 CDK5R1Q15078 307 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 STPG1Q5TH74 334 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 SHEQ5VZ18 495 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 OLFML2AQ68BL7 652 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 MRM1Q6IN84 353 aaKnown RBP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 HIST3H2AQ7L7L0 130 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 SLC16A11Q8NCK7 471 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 OR13C2Q8NGS9 318 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 IRF7Q92985 503 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 HIST1H2ACQ93077 130 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 ORAI1Q96D31 301 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 PELI1Q96FA3 418 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 CMTM3Q96MX0 182 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 OR1F2PQ96R84 312 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 UTP23Q9BRU9 249 aaKnown RBP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 TTYH1Q9H313 450 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 CCDC86Q9H6F5 360 aaKnown RBP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 TM7SF3Q9NS93 570 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 KLHL9Q9P2J3 617 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 ATPIF1Q9UII2 106 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 ANKRD20A5PA0PJZ0 165 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 SELENOFO60613 162 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 KRT33AO76009 404 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 F3P13726 295 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 HIST1H1TP22492 207 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 PTH2RP49190 550 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 GPR68Q15743 365 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 CSRP2Q16527 193 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 HES5Q5TA89 166 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 SLC48A1Q6P1K1 146 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 FAM111BQ6SJ93 734 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 NAXDQ8IW45 347 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 SERPINA12Q8IW75 414 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 EIF4E3Q8N5X7 224 aaKnown RBP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 ACOT4Q8N9L9 421 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 OR52B4Q8NGK2 314 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 ZNF416Q9BWM5 594 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 ACTRT3Q9BYD9 372 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 PCBD2Q9H0N5 130 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 NRIP3Q9NQ35 241 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 PRDM7Q9NQW5 492 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 AKAP7Q9P0M2 348 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 COPS3Q9UNS2 423 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 SLC35A3Q9Y2D2 325 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 ERI3O43414 337 aaKnown RBP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 KHDRBS3O75525 346 aaKnown RBP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 LYPD3O95274 346 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 PTHLHP12272 177 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 CSNK2A2P19784 350 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 MECP2P51608 486 aaKnown RBP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 H2BFSP57053 126 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 AP3S2P59780 193 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 ERVK-21P61565 698 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 MELKQ14680 651 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 C17orf107Q6ZR85 190 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 ARL14Q8N4G2 192 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 TMEM239Q8WW34 195 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 PMM1Q92871 262 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 CDS1Q92903 461 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 MS4A6EQ96DS6 147 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 ZNF681Q96N22 645 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 HAO2Q9NYQ3 351 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 OPN4Q9UHM6 478 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 SIGLEC7Q9Y286 467 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-204ENST00000422869 DNAH14Q0VDD8 3507 aa11.73□□□□□ -0.53
CTCFL-204ENST00000422869 HMSDA8MTL9 139 aa11.72□□□□□ -0.53
CTCFL-204ENST00000422869 SNRPGP15A8MWD9 76 aa11.72□□□□□ -0.53
CTCFL-204ENST00000422869 DNASE2O00115 360 aaPredicted RBP11.72□□□□□ -0.53
CTCFL-204ENST00000422869 SNAPC5O75971 98 aa11.72□□□□□ -0.53
CTCFL-204ENST00000422869 C6P13671 934 aa11.72□□□□□ -0.53
CTCFL-204ENST00000422869 PPP3CBP16298 524 aa11.72□□□□□ -0.53
CTCFL-204ENST00000422869 DPP4P27487 766 aa11.72□□□□□ -0.53
CTCFL-204ENST00000422869 DCTDP32321 178 aa11.72□□□□□ -0.53
CTCFL-204ENST00000422869 BCL6P41182 706 aa11.72□□□□□ -0.53
CTCFL-204ENST00000422869 CCR2P41597 374 aa11.72□□□□□ -0.53
CTCFL-204ENST00000422869 MAZP56270 477 aaKnown RBP11.72□□□□□ -0.53
CTCFL-204ENST00000422869 ACTC1P68032 377 aa11.72□□□□□ -0.53
CTCFL-204ENST00000422869 EEF1A1P68104 462 aaKnown RBP11.72□□□□□ -0.53
CTCFL-204ENST00000422869 ACTA1P68133 377 aa11.72□□□□□ -0.53
CTCFL-204ENST00000422869 C2orf68Q2NKX9 166 aa11.72□□□□□ -0.53
CTCFL-204ENST00000422869 ZC3H14Q6PJT7 736 aaKnown RBP11.72□□□□□ -0.53
CTCFL-204ENST00000422869 AMZ2Q86W34 360 aa11.72□□□□□ -0.53
CTCFL-204ENST00000422869 ZNF454Q8N9F8 522 aa11.72□□□□□ -0.53
CTCFL-204ENST00000422869 CXorf40AQ8TE69 158 aa11.72□□□□□ -0.53
CTCFL-204ENST00000422869 PNPLA2Q96AD5 504 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms