RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 ZNF100Q8IYN0 542 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 BHLHE22Q8NFJ8 381 aaPredicted RBP7.7□□□□□ -1.18
MDC1-204ENST00000422266 NRGNQ92686 78 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 MUCL1Q96DR8 90 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 ZC3HAV1LQ96H79 300 aaKnown RBP7.7□□□□□ -1.18
MDC1-204ENST00000422266 CCL19Q99731 98 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 NPAS1Q99742 590 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 PSD2Q9BQI7 771 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 SIKE1Q9BRV8 207 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 SPATA5L1Q9BVQ7 753 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 SRXN1Q9BYN0 137 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 POTEKPQ9BYX7 375 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 PIF1Q9H611 641 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 C12orf49Q9H741 205 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 EVA1AQ9H8M9 152 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 MED4Q9NPJ6 270 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 CTPS2Q9NRF8 586 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 INTS9Q9NV88 658 aaKnown RBP7.7□□□□□ -1.18
MDC1-204ENST00000422266 C6orf203Q9P0P8 240 aaPredicted RBP7.7□□□□□ -1.18
MDC1-204ENST00000422266 TMEM181Q9P2C4 612 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 TRIM33Q9UPN9 1127 aa7.7□□□□□ -1.18
MDC1-204ENST00000422266 TACC2O95359 2948 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 MED13LQ71F56 2210 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 IGKV3D-15A0A087WSY6 115 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 A0A1W2PNR3 127 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 CDHR4A6H8M9 788 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 EVPLLA8MZ36 301 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 C5orf58C9J3I9 102 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 CLIC1O00299 241 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 OIP5O43482 229 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 EFNA2O43921 213 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 GSNP06396 782 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 GPIP06744 558 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 CHRM4P08173 479 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 KLK2P20151 261 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 CXCR1P25024 350 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 SHC1P29353 583 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 CDKN2CP42773 168 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 ATP4BP51164 291 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 TGFBR3Q03167 851 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 FUT5Q11128 374 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 SYPL1Q16563 259 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 HSP90B2PQ58FF3 399 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 MRPL2Q5T653 305 aaKnown RBP7.69□□□□□ -1.18
MDC1-204ENST00000422266 WBP2NLQ6ICG8 309 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 OR7E24Q6IFN5 339 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 C5orf46Q6UWT4 87 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 ABHD12BQ7Z5M8 362 aaPredicted RBP7.69□□□□□ -1.18
MDC1-204ENST00000422266 CXorf67Q86X51 503 aaPredicted RBP7.69□□□□□ -1.18
MDC1-204ENST00000422266 KRT73Q86Y46 540 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 GABRG1Q8N1C3 465 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 OR52P1PQ8NH57 321 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 RADILQ96JH8 1075 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 INPP5KQ9BT40 448 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 TMUB1Q9BVT8 246 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 QRSL1Q9H0R6 528 aaKnown RBP7.69□□□□□ -1.18
MDC1-204ENST00000422266 LIME1Q9H400 295 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 CXorf56Q9H5V9 222 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 SLC9A8Q9Y2E8 581 aa7.69□□□□□ -1.18
MDC1-204ENST00000422266 NOSIPQ9Y314 301 aaKnown RBP7.69□□□□□ -1.18
MDC1-204ENST00000422266 HEATR5AQ86XA9 2040 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 TMED7-TICAM2A0A0A6YYA0 188 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.68□□□□□ -1.18
MDC1-204ENST00000422266 PRORSD1PA6NEY8 169 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 OR6C65A6NJZ3 312 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 SMAD9O15198 467 aaKnown RBP7.68□□□□□ -1.18
MDC1-204ENST00000422266 MRPL33O75394 65 aaKnown RBP7.68□□□□□ -1.18
MDC1-204ENST00000422266 GCM2O75603 506 aaPredicted RBP7.68□□□□□ -1.18
MDC1-204ENST00000422266 VAMP5O95183 116 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 ADAP00813 363 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 BCHEP06276 602 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 TFPTP0C1Z6 253 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 ETFAP13804 333 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 ETS2P15036 469 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 GGT1P19440 569 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 NCF2P19878 526 aaPredicted RBP7.68□□□□□ -1.18
MDC1-204ENST00000422266 HOXC12P31275 282 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 SLC16A1P53985 500 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 ADAM8P78325 824 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 NKX6-1P78426 367 aaPredicted RBP7.68□□□□□ -1.18
MDC1-204ENST00000422266 EPS8Q12929 822 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 SQLEQ14534 574 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 RGNQ15493 299 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 COX20Q5RI15 118 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 TIMM23BQ5SRD1 257 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 FBXW9Q5XUX1 488 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 ANKRD34AQ69YU3 496 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 ABLIM2Q6H8Q1 611 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 ADAM5Q6NVV9 412 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 BLOC1S3Q6QNY0 202 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 PAQR6Q6TCH4 344 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 BHLHA15Q7RTS1 189 aaPredicted RBP7.68□□□□□ -1.18
MDC1-204ENST00000422266 NUFIP2Q7Z417 695 aaKnown RBP7.68□□□□□ -1.18
MDC1-204ENST00000422266 ADGRG3Q86Y34 549 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 ANKFN1Q8N957 763 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 BBS10Q8TAM1 723 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 PNPT1Q8TCS8 783 aaKnown RBP7.68□□□□□ -1.18
MDC1-204ENST00000422266 TSPEARQ8WU66 669 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 SLC38A5Q8WUX1 472 aa7.68□□□□□ -1.18
MDC1-204ENST00000422266 TMEM171Q8WVE6 324 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms