RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 CACNA1EQ15878 2313 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TRAV27A0A087WT01 109 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CCDC182A6NF36 153 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CDC40O60508 579 aaKnown RBP eCLIP13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RFPL3O75679 317 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 OR7A10O76100 309 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SLC2A10O95528 541 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 OR2T7P0C7T2 308 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 GRK6P43250 576 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 HNRNPA0Q13151 305 aaKnown RBP13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 XKRXQ6PP77 449 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RABEPKQ7Z6M1 372 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SLC22A16Q86VW1 577 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TPRA1Q86W33 373 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 GATAD2AQ86YP4 633 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 POC5Q8NA72 575 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PLPP5Q8NEB5 264 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 OR2T27Q8NH04 317 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 OR4C3Q8NH37 302 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 OR51A7Q8NH64 312 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 DOK4Q8TEW6 326 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PHYHIPQ92561 330 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TRMT61AQ96FX7 289 aaKnown RBP13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CNN2Q99439 309 aaKnown RBP13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 KATNB1Q9BVA0 655 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 NRIP3Q9NQ35 241 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 HIF3AQ9Y2N7 669 aa13.34□□□□□ -0.27
HLA-DPA1-242ENST00000419277 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 GABRPO00591 440 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CASKO14936 926 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RNF13O43567 381 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SDC3O75056 442 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 NTN1O95631 604 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PPP1R3DO95685 299 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 DDAH2O95865 285 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 IL9P15248 144 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 IL12BP29460 328 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RANBP1P43487 201 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PNLIPRP2P54317 469 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 OR1D5P58170 312 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 FABP5Q01469 135 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 FHL1Q13642 323 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CRMP1Q14194 572 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 EBPQ15125 230 aaKnown RBP13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CCDC85BQ15834 202 aaPredicted RBP13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CCDC58Q4VC31 144 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 KLHL12Q53G59 568 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ZNF362Q5T0B9 420 aaPredicted RBP13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ARHGAP40Q5TG30 622 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RHBDD2Q6NTF9 364 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TMEM71Q6P5X7 295 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ATG4DQ86TL0 474 aaPredicted RBP13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ZSCAN1Q8NBB4 408 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 OR1N1Q8NGS0 311 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 OR1L3Q8NH93 324 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ZNF721Q8TF20 911 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PTP4A1Q93096 173 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ADIPOR1Q96A54 375 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 OTULINQ96BN8 352 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ERMAPQ96PL5 475 aaPredicted RBP13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 MFRPQ9BY79 579 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ADGRL4Q9HBW9 690 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PNO1Q9NRX1 252 aaKnown RBP13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 IL20RAQ9UHF4 553 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SIT1Q9Y3P8 196 aa13.33□□□□□ -0.27
HLA-DPA1-242ENST00000419277 GON4LQ3T8J9 2241 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 SPTBP11277 2137 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 TNRC6BQ9UPQ9 1833 aaKnown RBP13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 PCDH15Q96QU1 1955 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 IGLV3-12A0A075B6K2 115 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 FAM183AA6NL82 134 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ALG1L2C9J202 215 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 GTPBP1O00178 669 aaKnown RBP13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 WWP2O00308 870 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ADAM11O75078 769 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 APOL3O95236 402 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 UTS2O95399 124 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 BCKDHBP21953 392 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ALAS2P22557 587 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ZP2Q05996 745 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 RIN1Q13671 783 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ERV3-1Q14264 604 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 PON3Q15166 354 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ZNF791Q3KP31 576 aaPredicted RBP13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 NKAIN2Q5VXU1 208 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 LYSMD4Q5XG99 296 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 CACTIN-AS1Q8N1I8 211 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 SLC25A45Q8N413 288 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 TEX19Q8NA77 164 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 OR10H4Q8NGA5 316 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 PHOSPHO1Q8TCT1 267 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 NACC2Q96BF6 587 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ZNF501Q96CX3 271 aaPredicted RBP13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 TNFRSF13CQ96RJ3 184 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 MNTQ99583 582 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 KCNS3Q9BQ31 491 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 OR8D2Q9GZM6 311 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 FGF21Q9NSA1 209 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 TOR4AQ9NXH8 423 aa13.33□□□□□ -0.28
HLA-DPA1-242ENST00000419277 PLEKHB1Q9UF11 243 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms