RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 CCL19Q99731 98 aa15.84■□□□□ 0.13
CPNE1-210ENST00000416778 USB1Q9BQ65 265 aaKnown RBP15.84■□□□□ 0.13
CPNE1-210ENST00000416778 TRAPPC4Q9Y296 219 aa15.84■□□□□ 0.13
CPNE1-210ENST00000416778 HDGFL3Q9Y3E1 203 aa15.84■□□□□ 0.13
CPNE1-210ENST00000416778 IGKV3D-15A0A087WSY6 115 aa15.83■□□□□ 0.12
CPNE1-210ENST00000416778 UBDO15205 165 aa15.83■□□□□ 0.12
CPNE1-210ENST00000416778 PMS2P2O95744 297 aa15.83■□□□□ 0.12
CPNE1-210ENST00000416778 FESP07332 822 aa15.83■□□□□ 0.12
CPNE1-210ENST00000416778 TFPTP0C1Z6 253 aa15.83■□□□□ 0.12
CPNE1-210ENST00000416778 HPCAP84074 193 aa15.83■□□□□ 0.12
CPNE1-210ENST00000416778 H3F3AP84243 136 aa15.83■□□□□ 0.12
CPNE1-210ENST00000416778 TAB1Q15750 504 aa15.83■□□□□ 0.12
CPNE1-210ENST00000416778 GALNT5Q7Z7M9 940 aa15.83■□□□□ 0.12
CPNE1-210ENST00000416778 P3H2Q8IVL5 708 aa15.83■□□□□ 0.12
CPNE1-210ENST00000416778 KISS1RQ969F8 398 aaPredicted RBP15.83■□□□□ 0.12
CPNE1-210ENST00000416778 C18orf12Q96KH6 178 aa15.83■□□□□ 0.12
CPNE1-210ENST00000416778 OR11A1Q9GZK7 315 aa15.83■□□□□ 0.12
CPNE1-210ENST00000416778 ADAM19Q9H013 955 aa15.83■□□□□ 0.12
CPNE1-210ENST00000416778 OSGIN1Q9UJX0 560 aa15.83■□□□□ 0.12
CPNE1-210ENST00000416778 SPIN1Q9Y657 262 aaPredicted RBP15.83■□□□□ 0.12
CPNE1-210ENST00000416778 TMED7-TICAM2A0A0A6YYA0 188 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 ZNF716A6NP11 495 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 FAAHO00519 579 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 DBIP07108 87 aaKnown RBP15.82■□□□□ 0.12
CPNE1-210ENST00000416778 IL7RP16871 459 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 CCNA2P20248 432 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 IL32P24001 234 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 SLC1A3P43003 542 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 HTR3AP46098 478 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 POLR2JP52435 117 aaKnown RBP15.82■□□□□ 0.12
CPNE1-210ENST00000416778 NCMAPQ5T1S8 102 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 AGBL2Q5U5Z8 902 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 ALKBH2Q6NS38 261 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 ADAM5Q6NVV9 412 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 MSANTD1Q6ZTZ1 278 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 CCDC103Q8IW40 242 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 SLC38A5Q8WUX1 472 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 ITCHQ96J02 903 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 SMR3AQ99954 134 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 TPT1P8Q9HAU6 139 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 RLIMQ9NVW2 624 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 PRDM4Q9UKN5 801 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 TMED7Q9Y3B3 224 aa15.82■□□□□ 0.12
CPNE1-210ENST00000416778 CFAP73A6NFT4 308 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 HS3ST1O14792 307 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 ZNF208O43345 1280 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 DNPH1O43598 174 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 DSCAMO60469 2012 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 CNOT4O95628 575 aaKnown RBP15.81■□□□□ 0.12
CPNE1-210ENST00000416778 ETFAP13804 333 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 PAX1P15863 534 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 HOXB4P17483 251 aaPredicted RBP15.81■□□□□ 0.12
CPNE1-210ENST00000416778 IGHV1-2P23083 117 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 TACR3P29371 465 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 ACAA2P42765 397 aaKnown RBP15.81■□□□□ 0.12
CPNE1-210ENST00000416778 EPS8Q12929 822 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 GNA13Q14344 377 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 GTDC1Q4AE62 458 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 Q5PR19 223 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 MRPL2Q5T653 305 aaKnown RBP15.81■□□□□ 0.12
CPNE1-210ENST00000416778 ABLIM2Q6H8Q1 611 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 SEZ6L2Q6UXD5 910 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 BHLHA15Q7RTS1 189 aaPredicted RBP15.81■□□□□ 0.12
CPNE1-210ENST00000416778 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.81■□□□□ 0.12
CPNE1-210ENST00000416778 ZNF611Q8N823 705 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 OR9I1Q8NGQ6 314 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 WDR60Q8WVS4 1066 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 VPS33AQ96AX1 596 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 DNAJA3Q96EY1 480 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 POM121Q96HA1 1249 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 RMND5AQ9H871 391 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 TMEM181Q9P2C4 612 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 USH1CQ9Y6N9 552 aa15.81■□□□□ 0.12
CPNE1-210ENST00000416778 TMEM72A0PK05 275 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 FAM234BA2RU67 622 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 CDHR4A6H8M9 788 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 DPRXA6NFQ7 191 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 RAMP1O60894 148 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 LYZL6O75951 148 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 PGM3O95394 542 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 INHBBP09529 407 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 IMPDH2P12268 514 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 CRATP43155 626 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 POLR2HP52434 150 aaKnown RBP15.8■□□□□ 0.12
CPNE1-210ENST00000416778 MAP2K6P52564 334 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 SLC16A1P53985 500 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 OR2B6P58173 313 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 BIVMQ86UB2 503 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 LSRQ86X29 649 aaPredicted RBP15.8■□□□□ 0.12
CPNE1-210ENST00000416778 VRK2Q86Y07 508 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 PEX5LQ8IYB4 626 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 ZNF100Q8IYN0 542 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 MIER2Q8N344 545 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 ZNF433Q8N7K0 673 aaPredicted RBP15.8■□□□□ 0.12
CPNE1-210ENST00000416778 OR52P1PQ8NH57 321 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 AKAP1Q92667 903 aaKnown RBP eCLIP15.8■□□□□ 0.12
CPNE1-210ENST00000416778 GTF2H4Q92759 462 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 C7orf26Q96N11 449 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 GSX2Q9BZM3 304 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 NGBQ9NPG2 151 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms