RNA–Protein interactions for RNA: ENST00000416553.1

AP002856.2-201, humanhuman

TSL 3 BASIC

Gene AP002856.2, Length 584 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002856.2-201ENST00000416553 SPIN1Q9Y657 262 aaPredicted RBP12.01□□□□□ -0.49
AP002856.2-201ENST00000416553 CADP27708 2225 aa12.01□□□□□ -0.49
AP002856.2-201ENST00000416553 VPS13CQ709C8 3753 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 TMED7-TICAM2A0A0A6YYA0 188 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 CDHR4A6H8M9 788 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 CFAP73A6NFT4 308 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 ZNF724A8MTY0 619 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 HMGB1P1B2RPK0 211 aaPredicted RBP12□□□□□ -0.49
AP002856.2-201ENST00000416553 CLIC1O00299 241 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 FAAHO00519 579 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 PMS2P2O95744 297 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 ADAP00813 363 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 BCHEP06276 602 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 FESP07332 822 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 H2AFXP16104 143 aaPredicted RBP12□□□□□ -0.49
AP002856.2-201ENST00000416553 HOXB9P17482 250 aaPredicted RBP12□□□□□ -0.49
AP002856.2-201ENST00000416553 CCNA2P20248 432 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 ACAA2P42765 397 aaKnown RBP12□□□□□ -0.49
AP002856.2-201ENST00000416553 SLC1A3P43003 542 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 OR3A2P47893 321 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 CLK1P49759 484 aaKnown RBP12□□□□□ -0.49
AP002856.2-201ENST00000416553 CRISP3P54108 245 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 STX1BP61266 288 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 PPP2R2AP63151 447 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 EPS8Q12929 822 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 RGNQ15493 299 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 TSC22D1Q15714 1073 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 SFRP5Q5T4F7 317 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 ZNF836Q6ZNA1 936 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 LSRQ86X29 649 aaPredicted RBP12□□□□□ -0.49
AP002856.2-201ENST00000416553 VRK2Q86Y07 508 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 GOLGA6L1Q8N7Z2 621 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 STEAP2Q8NFT2 490 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 OR52P1PQ8NH57 321 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 DYDC1Q8WWB3 177 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 ZNF300Q96RE9 604 aaPredicted RBP12□□□□□ -0.49
AP002856.2-201ENST00000416553 VIPAS39Q9H9C1 493 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 SLC52A3Q9NQ40 469 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 INTS9Q9NV88 658 aaKnown RBP12□□□□□ -0.49
AP002856.2-201ENST00000416553 THUMPD1Q9NXG2 353 aaKnown RBP12□□□□□ -0.49
AP002856.2-201ENST00000416553 SLAMF8Q9P0V8 285 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 OSGIN1Q9UJX0 560 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 TMED7Q9Y3B3 224 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 HDGFL3Q9Y3E1 203 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 DSPPQ9NZW4 1301 aa12□□□□□ -0.49
AP002856.2-201ENST00000416553 A0A096LPI6 279 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 A0A0G2JPF8 293 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 TMEM72A0PK05 275 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 HNRNPCL2B2RXH8 293 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 HNRNPCL3B7ZW38 293 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 HNRNPCL1O60812 293 aaKnown RBP11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 NUDT7P0C024 238 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 GKN3PP0CG01 181 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 HNRNPCL4P0DMR1 293 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 CD99P14209 185 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 EDNRAP25101 427 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 TACR3P29371 465 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 POLR2HP52434 150 aaKnown RBP11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 ADAM8P78325 824 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 P2RY6Q15077 328 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 PDK3Q15120 406 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 ACKR1Q16570 336 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 LIN52Q52LA3 116 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 BEX5Q5H9J7 111 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 RPS26P11Q5JNZ5 115 aaPredicted RBP11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 GALNT5Q7Z7M9 940 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 WFDC8Q8IUA0 241 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 ZNF440Q8IYI8 595 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 CLIP4Q8N3C7 705 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 CKAP2Q8WWK9 683 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 S100PBPQ96BU1 408 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 TMEM19Q96HH6 336 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 ADAM19Q9H013 955 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 ARGLU1Q9NWB6 273 aaPredicted RBP11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 BEX4Q9NWD9 120 aaPredicted RBP11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 SLC25A37Q9NYZ2 338 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 CCDC167Q9P0B6 97 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 PRSS50Q9UI38 385 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 ZNF232Q9UNY5 417 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 TRAPPC4Q9Y296 219 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 CHST2Q9Y4C5 530 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 ZFHX3Q15911 3703 aa11.99□□□□□ -0.49
AP002856.2-201ENST00000416553 IGKV3D-15A0A087WSY6 115 aa11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 ZNF716A6NP11 495 aa11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 ZNF208O43345 1280 aa11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 BMP2P12643 396 aa11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 HOXC12P31275 282 aa11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 NTF4P34130 210 aa11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 OR2B6P58173 313 aa11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 H3F3AP84243 136 aa11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 ITGADQ13349 1161 aa11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 LARS2Q15031 903 aaKnown RBP11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 PAGE3Q5JUK9 113 aa11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 LRIF1Q5T3J3 769 aa11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 ABLIM2Q6H8Q1 611 aa11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 Q6ZT83 130 aa11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 CCDC103Q8IW40 242 aa11.98□□□□□ -0.49
AP002856.2-201ENST00000416553 MSRB3Q8IXL7 192 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms