RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 CAMK2DQ13557 499 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 TMEM255AQ5JRV8 349 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 FBXO42Q6P3S6 717 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 RTL4Q6ZR62 310 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 NUDT18Q6ZVK8 323 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 BTN2A1Q7KYR7 527 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 OVCH1Q7RTY7 1134 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 SYS1Q8N2H4 156 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 OR51Q1Q8NH59 317 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 LCN9Q8WX39 176 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 GHSRQ92847 366 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 YIPF5Q969M3 257 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 ARPC5LQ9BPX5 153 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 APOOQ9BUR5 198 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 TMEM168Q9H0V1 697 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 TRPV4Q9HBA0 871 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 TMEM27Q9HBJ8 222 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 LYRM4Q9HD34 91 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 ST6GALNAC2Q9UJ37 374 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 SERTAD3Q9UJW9 196 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 DAPP1Q9UN19 280 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 PRELID1Q9Y255 219 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 SLC22A7Q9Y694 548 aa9.05□□□□□ -0.96
CD44-206ENST00000415148 OR5K3A6NET4 321 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 LRRN3E7EW58 273 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 GPR171O14626 319 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 ZNF749O43361 778 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 NARSO43776 548 aaKnown RBP9.04□□□□□ -0.96
CD44-206ENST00000415148 OR7A10O76100 309 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 KAT7O95251 611 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 WNT1P04628 370 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 OR2T7P0C7T2 308 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 EPXP11678 715 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 SNRPBP14678 240 aaKnown RBP9.04□□□□□ -0.96
CD44-206ENST00000415148 MAP3K8P41279 467 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 ZNF81P51508 661 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 HCCSP53701 268 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 OR12D2P58182 307 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 ACTA2P62736 377 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 ACTG2P63267 376 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 RUNX2Q13950 521 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 CAMK1Q14012 370 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 MFSD13AQ14CX5 517 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 AANATQ16613 207 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 GPR139Q6DWJ6 353 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 ARHGAP11AQ6P4F7 1023 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 VITQ6UXI7 678 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 THSD4Q6ZMP0 1018 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 SSX6Q7RTT6 188 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 FGD2Q7Z6J4 655 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 OR2T27Q8NH04 317 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 ORAI1Q96D31 301 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 ZFP3Q96NJ6 502 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 CACNG6Q9BXT2 260 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 SLC17A9Q9BYT1 436 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 TWSG1Q9GZX9 223 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 OR51V1Q9H2C8 321 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 LRRN3Q9H3W5 708 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 AUNIPQ9H7T9 357 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 SPATA2Q9UM82 520 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 TP53BP1Q12888 1972 aaPredicted RBP9.04□□□□□ -0.96
CD44-206ENST00000415148 A0A1W2PP55 124 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 TRIM77I1YAP6 450 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 SNAPC5O75971 98 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 HOXC4P09017 264 aaPredicted RBP9.04□□□□□ -0.96
CD44-206ENST00000415148 H2AFB2P0C5Z0 115 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 GKN3PP0CG01 181 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 NT5EP21589 574 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 NOS3P29474 1203 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 SLC6A6P31641 620 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 GBX2P52951 348 aaPredicted RBP9.04□□□□□ -0.96
CD44-206ENST00000415148 SLC16A1P53985 500 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 KIR2DS3Q14952 304 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 GSG1Q2KHT4 349 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 TRMT12Q53H54 448 aaKnown RBP9.04□□□□□ -0.96
CD44-206ENST00000415148 FAAH2Q6GMR7 532 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 GRAMD2AQ8IUY3 354 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 POMGNT2Q8NAT1 580 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 OR4E2Q8NGC2 313 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 OR13C2Q8NGS9 318 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 GIMAP1Q8WWP7 306 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 OR2A5Q96R48 311 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 MYADMQ96S97 322 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 DLL4Q9NR61 685 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 AKAP7Q9P0M2 348 aaPredicted RBP9.04□□□□□ -0.96
CD44-206ENST00000415148 KCNE5Q9UJ90 142 aa9.04□□□□□ -0.96
CD44-206ENST00000415148 MEIKINA0A087WXM9 373 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 TEX51A0A1B0GUA7 166 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 C5orf67F2Z3F1 127 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 FLRT2O43155 660 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 BRINP1O60477 761 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 UCHL1P09936 223 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 SULT1A3P0DMM9 295 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 SULT1A4P0DMN0 295 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 TYRP1P17643 537 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 POLR2CP19387 275 aaPredicted RBP9.03□□□□□ -0.96
CD44-206ENST00000415148 PYCR1P32322 319 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 GJA4P35212 333 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 RUNX3Q13761 415 aa9.03□□□□□ -0.96
CD44-206ENST00000415148 CRMP1Q14194 572 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms