RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 PIGQQ9BRB3 760 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 OR11A1Q9GZK7 315 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 POLR2J2Q9GZM3 115 aaKnown RBP11.84□□□□□ -0.51
CNOT4-204ENST00000414802 POLR2J3Q9H1A7 115 aaKnown RBP11.84□□□□□ -0.51
CNOT4-204ENST00000414802 SEMA6AQ9H2E6 1030 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 YY1AP1Q9H869 796 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 NMNAT1Q9HAN9 279 aaPredicted RBP11.84□□□□□ -0.51
CNOT4-204ENST00000414802 SPRR3Q9UBC9 169 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 ZNF337Q9Y3M9 751 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 U3KQV3 271 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 CHD6Q8TD26 2715 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 IGKV1D-42A0A075B6H8 117 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 TRGV5A0A0B4J1U4 118 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 ZC3H12DA2A288 527 aaKnown RBP11.84□□□□□ -0.51
CNOT4-204ENST00000414802 C7orf72A4D263 438 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 ATXN7O15265 892 aaPredicted RBP11.84□□□□□ -0.51
CNOT4-204ENST00000414802 GADD45GO95257 159 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 CRYABP02511 175 aaKnown RBP11.84□□□□□ -0.51
CNOT4-204ENST00000414802 CXCR1P25024 350 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 SFTPDP35247 375 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 EIF1P41567 113 aaKnown RBP11.84□□□□□ -0.51
CNOT4-204ENST00000414802 HTR3AP46098 478 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 UGT2B15P54855 530 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 GFRA1P56159 465 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 DLX5P56178 289 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 ST3GAL3Q11203 375 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 TRAM2Q15035 370 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 C3AR1Q16581 482 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 TMEM179BQ7Z7N9 219 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 MEX3DQ86XN8 651 aaKnown RBP11.84□□□□□ -0.51
CNOT4-204ENST00000414802 PFN4Q8NHR9 129 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 NR4A3Q92570 626 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 SLC38A4Q969I6 547 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 SNRNP40Q96DI7 357 aaKnown RBP11.84□□□□□ -0.51
CNOT4-204ENST00000414802 BBC3Q96PG8 261 aaPredicted RBP11.84□□□□□ -0.51
CNOT4-204ENST00000414802 ASF1BQ9NVP2 202 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 CHRNA9Q9UGM1 479 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 LYVE1Q9Y5Y7 322 aa11.84□□□□□ -0.51
CNOT4-204ENST00000414802 PCNX1Q96RV3 2341 aa11.83□□□□□ -0.51
CNOT4-204ENST00000414802 A0A087WUJ7 227 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 TTLL8A6PVC2 850 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 H0YC42 278 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 TNFRSF11BO00300 401 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 GNGT2O14610 69 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 ADAMDEC1O15204 470 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 CLOCKO15516 846 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 SEC14L5O43304 696 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 HNRNPRO43390 633 aaKnown RBP11.83□□□□□ -0.52
CNOT4-204ENST00000414802 DEAF1O75398 565 aaPredicted RBP11.83□□□□□ -0.52
CNOT4-204ENST00000414802 BAG2O95816 211 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 LDLRP01130 860 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 POU3F2P20265 443 aaPredicted RBP11.83□□□□□ -0.52
CNOT4-204ENST00000414802 FASP25445 335 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 IFNA8P32881 189 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 APOBEC1P41238 236 aaKnown RBP11.83□□□□□ -0.52
CNOT4-204ENST00000414802 MLLT10P55197 1068 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 TPD52P55327 224 aaPredicted RBP11.83□□□□□ -0.52
CNOT4-204ENST00000414802 C19orf57Q0VDD7 668 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 SELENBP1Q13228 472 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 SEC23BQ15437 767 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 ATP6AP1Q15904 470 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 GLYR1Q49A26 553 aaPredicted RBP11.83□□□□□ -0.52
CNOT4-204ENST00000414802 SWT1Q5T5J6 900 aaKnown RBP11.83□□□□□ -0.52
CNOT4-204ENST00000414802 C3orf33Q6P1S2 294 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 PODNL1Q6PEZ8 512 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 TBPL2Q6SJ96 375 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 UBQLNLQ8IYU4 475 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 NEIL3Q8TAT5 605 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 SLC7A13Q8TCU3 470 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 BARD1Q99728 777 aaKnown RBP11.83□□□□□ -0.52
CNOT4-204ENST00000414802 REEP1Q9H902 201 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 ACKR4Q9NPB9 350 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 AGPAT4Q9NRZ5 378 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 DNAJB9Q9UBS3 223 aa11.83□□□□□ -0.52
CNOT4-204ENST00000414802 MRPS18CQ9Y3D5 142 aaKnown RBP11.83□□□□□ -0.52
CNOT4-204ENST00000414802 SAMHD1Q9Y3Z3 626 aaKnown RBP11.83□□□□□ -0.52
CNOT4-204ENST00000414802 ALPK2Q86TB3 2170 aa11.82□□□□□ -0.52
CNOT4-204ENST00000414802 PHF3Q92576 2039 aaKnown RBP11.82□□□□□ -0.52
CNOT4-204ENST00000414802 IGHG3P01860 377 aa11.82□□□□□ -0.52
CNOT4-204ENST00000414802 TFPIP10646 304 aa11.82□□□□□ -0.52
CNOT4-204ENST00000414802 PNMTP11086 282 aa11.82□□□□□ -0.52
CNOT4-204ENST00000414802 HOXB6P17509 224 aaKnown RBP11.82□□□□□ -0.52
CNOT4-204ENST00000414802 BMP7P18075 431 aa11.82□□□□□ -0.52
CNOT4-204ENST00000414802 ELK4P28324 431 aa11.82□□□□□ -0.52
CNOT4-204ENST00000414802 CLDN20P56880 219 aa11.82□□□□□ -0.52
CNOT4-204ENST00000414802 C1QL3Q5VWW1 255 aa11.82□□□□□ -0.52
CNOT4-204ENST00000414802 ZNF324BQ6AW86 544 aaPredicted RBP11.82□□□□□ -0.52
CNOT4-204ENST00000414802 AAGABQ6PD74 315 aa11.82□□□□□ -0.52
CNOT4-204ENST00000414802 C10orf67Q8IYJ2 551 aa11.82□□□□□ -0.52
CNOT4-204ENST00000414802 HS3ST5Q8IZT8 346 aa11.82□□□□□ -0.52
CNOT4-204ENST00000414802 OR4C15Q8NGM1 316 aa11.82□□□□□ -0.52
CNOT4-204ENST00000414802 FAR1Q8WVX9 515 aa11.82□□□□□ -0.52
CNOT4-204ENST00000414802 INTS1Q8N201 2190 aaKnown RBP11.82□□□□□ -0.52
CNOT4-204ENST00000414802 ESPL1Q14674 2120 aa11.82□□□□□ -0.52
CNOT4-204ENST00000414802 A0A087WUU8 490 aa11.81□□□□□ -0.52
CNOT4-204ENST00000414802 A0A1B0GTH9 108 aa11.81□□□□□ -0.52
CNOT4-204ENST00000414802 A0A1W2PNR3 127 aa11.81□□□□□ -0.52
CNOT4-204ENST00000414802 A0A1W2PRQ8 180 aa11.81□□□□□ -0.52
CNOT4-204ENST00000414802 SAC3D1A6NKF1 404 aa11.81□□□□□ -0.52
CNOT4-204ENST00000414802 E2F6O75461 281 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms