RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TAS2R7Q9NYW3 318 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 CNIH4Q9P003 139 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 SPRR3Q9UBC9 169 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 STEAP1Q9UHE8 339 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 PRDM4Q9UKN5 801 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 BOKQ9UMX3 212 aaPredicted RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 WBP11Q9Y2W2 641 aaKnown RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 SLC6A5Q9Y345 797 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 KCNE3Q9Y6H6 103 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 USH1CQ9Y6N9 552 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 PCNX1Q96RV3 2341 aa4.43□□□□□ -1.7
VPS41-205ENST00000414632 SPTAN1Q13813 2472 aaKnown RBP4.43□□□□□ -1.7
VPS41-205ENST00000414632 ICE1Q9Y2F5 2266 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 C15orf38-AP3S2A0A0A6YYH1 394 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 RNF103-CHMP3A0A140T963 221 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 OR6C70A6NIJ9 312 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 TRPC5OSA6NMA1 111 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 KDM4EB2RXH2 506 aaPredicted RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 B4DXG7 233 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 E9PBE3 544 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 F5H0A9 414 aaPredicted RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 PLOD2O00469 737 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 ZNF195O14628 629 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 KLF11O14901 512 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 ANKRD28O15084 1053 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 TO15178 435 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 ACOX3O15254 700 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 TRIM3O75382 744 aaPredicted RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 PSMG1O95456 288 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 LDLRP01130 860 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 HMGN2P05204 90 aaKnown RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 ALOX5P09917 674 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 CD1EP15812 388 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 PRPS1L1P21108 318 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 IL12AP29459 219 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 EVI2BP34910 448 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 PTGS2P35354 604 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 RPL3P39023 403 aaKnown RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 CDKN2CP42773 168 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 CA7P43166 264 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 CCT3P49368 545 aaKnown RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 HCFC1P51610 2035 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 AQP5P55064 265 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 DCAF7P61962 342 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 HBA1P69905 142 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 MRPS22P82650 360 aaKnown RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 RBPJQ06330 500 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 SLC10A1Q14973 349 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 ZNHIT3Q15649 155 aaPredicted RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 DUSP5Q16690 384 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 DECR1Q16698 335 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 LSM12Q3MHD2 195 aaKnown RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 TBRG1Q3YBR2 411 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 NRN1LQ496H8 165 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 EIPR1Q53HC9 387 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 DCST1Q5T197 706 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 FNDC7Q5VTL7 733 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 SP5Q6BEB4 398 aaPredicted RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 CCDC144NLQ6NUI1 221 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 MFSD12Q6NUT3 480 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 ZNF585AQ6P3V2 769 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 DCHS2Q6V1P9 2916 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 Q6ZSN1 163 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 TRILQ7L0X0 811 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 NUP54Q7Z3B4 507 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 HMGN2P46Q86SG4 172 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 MARCH3Q86UD3 253 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 DOLPP1Q86YN1 238 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 DND1Q8IYX4 353 aaKnown RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 ZNF808Q8N4W9 903 aaPredicted RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 COX18Q8N8Q8 333 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 WDSUB1Q8N9V3 476 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 GATSQ8NAP1 163 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 C17orf47Q8NEP4 570 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 OR5D16Q8NGK9 328 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 OR5M1Q8NGP8 315 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 OR1J4Q8NGS1 313 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 RFWD2Q8NHY2 731 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 PNPT1Q8TCS8 783 aaKnown RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 SSC4DQ8WTU2 575 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 CKAP2Q8WWK9 683 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 OR5P2Q8WZ92 322 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 COQ8BQ96D53 544 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 ERP27Q96DN0 273 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 ARSGQ96EG1 525 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 KTI12Q96EK9 354 aaPredicted RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 RNF125Q96EQ8 232 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 ZNF764Q96H86 408 aaPredicted RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 REXO5Q96IC2 774 aaKnown RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 BOD1Q96IK1 185 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 SLC35G5Q96KT7 338 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 C7orf26Q96N11 449 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 MS4A4EQ96PG1 132 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 INPP5KQ9BT40 448 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 LMF2Q9BU23 707 aaKnown RBP4.42□□□□□ -1.7
VPS41-205ENST00000414632 ANGPTL4Q9BY76 406 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 RTN4RQ9BZR6 473 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 SERHL2Q9H4I8 314 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 ZDHHC11Q9H8X9 412 aa4.42□□□□□ -1.7
VPS41-205ENST00000414632 PLEKHA2Q9HB19 425 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms