RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 LINC01620Q4KN68 170 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 ZNF311Q5JNZ3 666 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 CASC1Q6TDU7 716 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 ARSKQ6UWY0 536 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 SCARA5Q6ZMJ2 495 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 LANCL3Q6ZV70 420 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 CATSPER4Q7RTX7 472 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 TRPM8Q7Z2W7 1104 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 PPP1R27Q86WC6 154 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 C17orf82Q86X59 251 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 GCNT2Q8N0V5 402 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 PSMG2Q969U7 264 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 C16orf74Q96GX8 76 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 DHTKD1Q96HY7 919 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 TECTBQ96PL2 329 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 VPS35Q96QK1 796 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 ZNF184Q99676 751 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 MRPL13Q9BYD1 178 aaKnown RBP2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 CCSER1Q9C0I3 900 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 NMUR2Q9GZQ4 415 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 UTP6Q9NYH9 597 aaKnown RBP2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 MRPL39Q9NYK5 338 aaKnown RBP2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 ONECUT1Q9UBC0 465 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 B9D1Q9UPM9 204 aa2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 COL11A1P12107 1806 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P11-201ENST00000413899 ESYT2A0FGR8 921 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 HIP1O00291 1037 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 RNF113AO15541 343 aaKnown RBP2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 DUX1O43812 170 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 LANCL1O43813 399 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 ZNF254O75437 659 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 STAM2O75886 525 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 TRIM16O95361 564 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 ANP32DO95626 131 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 HBQ1P09105 142 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 CCDC166P0CW27 439 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 HSPD1P10809 573 aaKnown RBP2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 DRD3P35462 400 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 RPL29P47914 159 aaKnown RBP2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 NAPAP54920 295 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 STX17P56962 302 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 ATXN7L3Q14CW9 347 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 LRRC36Q1X8D7 754 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 KLHL40Q2TBA0 621 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 OR8G2PQ6IF36 304 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 SCYL2Q6P3W7 929 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 FRA10AC1Q70Z53 315 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 CENPUQ71F23 418 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 NECAB1Q8N987 351 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 FGGYQ96C11 551 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 ZNF414Q96IQ9 312 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 GPA33Q99795 319 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 PPDPFQ9H3Y8 114 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 CAB39LQ9H9S4 337 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 PLSCR3Q9NRY6 295 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 RDH8Q9NYR8 311 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 ACTR3BQ9P1U1 418 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 TRMT112Q9UI30 125 aaKnown RBP2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 EP400Q96L91 3159 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 MROH7-TTC4A0A0A0MT08 1334 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 MROH5Q6ZUA9 1318 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 ZNF532Q9HCE3 1301 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 ABCA7Q8IZY2 2146 aa2.62□□□□□ -1.99
HMGB1P11-201ENST00000413899 HCFC1P51610 2035 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 SIP14410 1827 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 FER1L5A0AVI2 2057 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 IGHV7-81A0A0B4J1V7 117 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 C19orf81C9J6K1 198 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 E7EWF7 191 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 SDHDO14521 159 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 PFKFB2O60825 505 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 GPX5O75715 221 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 CLUP10909 449 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 SYT1P21579 422 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 ATP5A1P25705 553 aaKnown RBP2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 ADORA2BP29275 332 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 KIR2DS2P43631 304 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 DHPSP49366 369 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 MTTPP55157 894 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 NTHL1P78549 312 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 NUCB2P80303 420 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 EGFEM1PQ0D2K5 195 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 SCGB2A2Q13296 93 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 ELAVL3Q14576 367 aaKnown RBP2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 TRIP10Q15642 601 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 KYAT1Q16773 422 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 CCDC57Q2TAC2 916 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 SPATA46Q5T0L3 261 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 OTPQ5XKR4 325 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 FAM173BQ6P4H8 233 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 BLOC1S2Q6QNY1 142 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 KRTAP11-1Q8IUC1 163 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 OR2L5Q8NG80 312 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 OR2A12Q8NGT7 310 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 SETD7Q8WTS6 366 aaKnown RBP2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 TRUB1Q8WWH5 349 aaKnown RBP2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 HAVCR1Q96D42 359 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 SDSLQ96GA7 329 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 HPDLQ96IR7 371 aa2.61□□□□□ -1.99
HMGB1P11-201ENST00000413899 NOL4LQ96MY1 436 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms