RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 GMDSO60547 372 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 HOXD4P09016 255 aaPredicted RBP16.28■□□□□ 0.2
SDCBP-202ENST00000413219 OR2T7P0C7T2 308 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 GKN3PP0CG01 181 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 RPS11P62280 158 aaKnown RBP eCLIP16.28■□□□□ 0.2
SDCBP-202ENST00000413219 SIRPAP78324 504 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 TNFRSF17Q02223 184 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 KRT33BQ14525 404 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 TP53I3Q53FA7 332 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 EXOSC6Q5RKV6 272 aaKnown RBP16.28■□□□□ 0.2
SDCBP-202ENST00000413219 OLFML2AQ68BL7 652 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 ZNF425Q6IV72 752 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 LINGO2Q7L985 606 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 UBE2Q1Q7Z7E8 422 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 POMGNT2Q8NAT1 580 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 OR2T27Q8NH04 317 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 PCNPQ8WW12 178 aaKnown RBP16.28■□□□□ 0.2
SDCBP-202ENST00000413219 BEX1Q9HBH7 125 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 KLHL9Q9P2J3 617 aa16.28■□□□□ 0.2
SDCBP-202ENST00000413219 PPIEQ9UNP9 301 aaKnown RBP16.28■□□□□ 0.2
SDCBP-202ENST00000413219 AK6Q9Y3D8 172 aaKnown RBP16.28■□□□□ 0.2
SDCBP-202ENST00000413219 IGLON5A6NGN9 336 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 OR6C65A6NJZ3 312 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 TRIM77I1YAP6 450 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 PDCD5O14737 125 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 GPRIN2O60269 458 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 KRT33AO76009 404 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 TOXO94900 526 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 PPP1R3DO95685 299 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 ACSM4P0C7M7 580 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 SLC6A6P31641 620 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 VEGFCP49767 419 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 RAP2BP61225 183 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 MRPS10P82664 201 aaKnown RBP16.27■□□□□ 0.2
SDCBP-202ENST00000413219 RPL6Q02878 288 aaKnown RBP16.27■□□□□ 0.2
SDCBP-202ENST00000413219 GGTLC2Q14390 218 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 ZNF234Q14588 700 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 TJAP1Q5JTD0 557 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 SFRP4Q6FHJ7 346 aaPredicted RBP16.27■□□□□ 0.2
SDCBP-202ENST00000413219 ZNF613Q6PF04 617 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 FAM198BQ6UWH4 519 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 GLDNQ6ZMI3 551 aaPredicted RBP16.27■□□□□ 0.2
SDCBP-202ENST00000413219 C3P1Q6ZMU1 363 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 NUDT18Q6ZVK8 323 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 SYT9Q86SS6 491 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 OR4K14Q8NGD5 310 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 PMM1Q92871 262 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 ORAI3Q9BRQ5 295 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 REG4Q9BYZ8 158 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 PIPOXQ9P0Z9 390 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 SERTAD3Q9UJW9 196 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 ICAM5Q9UMF0 924 aa16.27■□□□□ 0.2
SDCBP-202ENST00000413219 BRCA2P51587 3418 aa16.27■□□□□ 0.19
SDCBP-202ENST00000413219 IFNGR1P15260 489 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 ILF3Q12906 894 aaKnown RBP eCLIP16.26■□□□□ 0.19
SDCBP-202ENST00000413219 FCRLBQ6BAA4 426 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 FAM199XQ6PEV8 388 aaPredicted RBP16.26■□□□□ 0.19
SDCBP-202ENST00000413219 CYB561A3Q8NBI2 242 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 HHIPL1Q96JK4 782 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 SFXN2Q96NB2 322 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 LRRC3BQ96PB8 259 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 ZNF559Q9BR84 538 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 MRI1Q9BV20 369 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 SYNPO2LQ9H987 977 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 MEPEQ9NQ76 525 aaPredicted RBP16.26■□□□□ 0.19
SDCBP-202ENST00000413219 PRDM9Q9NQV7 894 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 MGAT4CQ9UBM8 478 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 FBXL4Q9UKA2 621 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 FLVCR2Q9UPI3 526 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 TRAV27A0A087WT01 109 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 A0A1W2PPK0 400 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 IL5P05113 134 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 PEBP1P30086 187 aaKnown RBP16.26■□□□□ 0.19
SDCBP-202ENST00000413219 MECP2P51608 486 aaKnown RBP16.26■□□□□ 0.19
SDCBP-202ENST00000413219 DCST2Q5T1A1 773 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 CHMP1BQ7LBR1 199 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 IZUMO1Q8IYV9 350 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 OR52I2Q8NH67 350 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 SMAP2Q8WU79 429 aaPredicted RBP16.26■□□□□ 0.19
SDCBP-202ENST00000413219 COL26A1Q96A83 441 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 MRPL48Q96GC5 212 aaKnown RBP16.26■□□□□ 0.19
SDCBP-202ENST00000413219 CNN2Q99439 309 aaKnown RBP16.26■□□□□ 0.19
SDCBP-202ENST00000413219 AIFM2Q9BRQ8 373 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 OR10A4Q9H209 315 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 CD93Q9NPY3 652 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 PRSS16Q9NQE7 514 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 TAS2R5Q9NYW4 299 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 C19orf53Q9UNZ5 99 aaPredicted RBP16.26■□□□□ 0.19
SDCBP-202ENST00000413219 SESN1Q9Y6P5 492 aa16.26■□□□□ 0.19
SDCBP-202ENST00000413219 MFSD2BA6NFX1 497 aa16.25■□□□□ 0.19
SDCBP-202ENST00000413219 SNRPGP15A8MWD9 76 aa16.25■□□□□ 0.19
SDCBP-202ENST00000413219 L7N2F9 121 aa16.25■□□□□ 0.19
SDCBP-202ENST00000413219 AIPO00170 330 aa16.25■□□□□ 0.19
SDCBP-202ENST00000413219 MID1O15344 667 aa16.25■□□□□ 0.19
SDCBP-202ENST00000413219 KCNJ13O60928 360 aa16.25■□□□□ 0.19
SDCBP-202ENST00000413219 OR2A4O95047 310 aa16.25■□□□□ 0.19
SDCBP-202ENST00000413219 ALDOBP05062 364 aa16.25■□□□□ 0.19
SDCBP-202ENST00000413219 DBPQ10586 325 aaPredicted RBP16.25■□□□□ 0.19
SDCBP-202ENST00000413219 RPE65Q16518 533 aa16.25■□□□□ 0.19
SDCBP-202ENST00000413219 MTFR2Q6P444 385 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms